RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 FRMD8P1Q9BZ68 369 aaPredicted RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 LHX5Q9H2C1 402 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 RGCCQ9H4X1 137 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 ADA2Q9NZK5 511 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 ZNF608Q9ULD9 1512 aaPredicted RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 PLEKHG2Q9H7P9 1386 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 IGHV6-1A0A0B4J1U7 121 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 CENPBD1B2RD01 187 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 IL3RAP26951 378 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 IDH2P48735 452 aaKnown RBP2.54□□□□□ -2
HMGCS1-207ENST00000514610 BCAP31P51572 246 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 PPP1CAP62136 330 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 TBPL2Q6SJ96 375 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 TCP10LQ8TDR4 215 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 OR8D1Q8WZ84 308 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 IL22Q9GZX6 179 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 CHRAC1Q9NRG0 131 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 PPIL1Q9Y3C6 166 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
HMGCS1-207ENST00000514610 SEC16AO15027 2179 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 C2orf16Q68DN1 1984 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 LOC100653049A0A140TA62 436 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.53□□□□□ -2
HMGCS1-207ENST00000514610 KRT34O76011 436 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 SMC2O95347 1197 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 MPV17P39210 176 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 ORMDL3Q8N138 153 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 ZCCHC24Q8N2G6 241 aaKnown RBP2.53□□□□□ -2
HMGCS1-207ENST00000514610 OR52N1Q8NH53 320 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 TMEM234Q8WY98 164 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 NAPGQ99747 312 aaPredicted RBP2.53□□□□□ -2
HMGCS1-207ENST00000514610 ANP32EQ9BTT0 268 aa2.53□□□□□ -2
HMGCS1-207ENST00000514610 NEURL4Q96JN8 1562 aa2.53□□□□□ -2.01
HMGCS1-207ENST00000514610 TRIP11Q15643 1979 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 RPRD2Q5VT52 1461 aaKnown RBP2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 LOC102724200A0A096LPH7 203 aaPredicted RBP2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 ISPDA4D126 451 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 PRAMEF26H0Y7S4 382 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 MFNGO00587 321 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 UPK1BO75841 260 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 SCO1O75880 301 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 TTC4O95801 387 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 GCGP01275 180 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 MMP7P09237 267 aaPredicted RBP2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 ARL2P36404 184 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 OR2W3Q7Z3T1 314 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 LINC00523Q86TU6 105 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 BBS7Q8IWZ6 715 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 SFXN5Q8TD22 340 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 TFGQ92734 400 aaPredicted RBP2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 TOP1MTQ969P6 601 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 ANGPTL4Q9BY76 406 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 CHRNA10Q9GZZ6 450 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 SND1-IT1Q9HBX3 110 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 RWDD2AQ9UIY3 292 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 SVILO95425 2214 aa2.52□□□□□ -2.01
HMGCS1-207ENST00000514610 TICRRQ7Z2Z1 1910 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 GOLGA8JA6NMD2 632 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 CLDN34H7C241 214 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 DFFAO00273 331 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 GOLGA8HP0CJ92 632 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 COL8A2P25067 703 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 CSKP41240 450 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 SLC35A1P78382 337 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 BTN1A1Q13410 526 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 ASCL4Q6XD76 172 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 FBXO36Q8NEA4 188 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 OR2M7Q8NG81 312 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 OR5T3Q8NGG3 340 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 OR1S1Q8NH92 325 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 SNF8Q96H20 258 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 Q96MT0 163 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 MS4A8Q9BY19 250 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 FBXO44Q9H4M3 255 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 FANCEQ9HB96 536 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 KPTNQ9Y664 436 aa2.51□□□□□ -2.01
HMGCS1-207ENST00000514610 BAZ2AQ9UIF9 1905 aaKnown RBP2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 TRAV8-6A0A0B4J262 113 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 CENPXA8MT69 81 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 A8MWL6 223 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 MYL12BO14950 172 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 MAS1P04201 325 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 MSR1P21757 451 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 PAX6P26367 422 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 PRSS3P35030 304 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 HCCSP53701 268 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 MTPNP58546 118 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 RPS11P62280 158 aaKnown RBP eCLIP2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 ZNF678Q5SXM1 525 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 HHATQ5VTY9 493 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 SLC35D2Q76EJ3 337 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 DAZ4Q86SG3 579 aaKnown RBP2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 CALHM3Q86XJ0 350 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 SLC7A5P1Q8MH63 180 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 CYB561A3Q8NBI2 242 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 TMEM104Q8NE00 496 aa2.5□□□□□ -2.01
HMGCS1-207ENST00000514610 SHANK2-AS3Q9BTD1 123 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms