RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ACAA1P09110 424 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 EPHA8P29322 1005 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ECI1P42126 302 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ZNF117Q03924 483 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ACER2Q5QJU3 275 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 OR4D11Q8NGI4 311 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 SPACA9Q96E40 222 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 OMGP23515 440 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 CLDN15P56746 228 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 TXNIPQ9H3M7 391 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 MUC1P15941 1255 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-213ENST00000514442 ZIC1Q15915 447 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 REG4Q9BYZ8 158 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 CBY3A6NI87 242 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 MSTNO14793 375 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 GREM1O60565 184 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 TK1P04183 234 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 DHODHQ02127 395 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 ZNF85Q03923 595 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 FOXO1Q12778 655 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 SKP2Q13309 424 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 EXD3Q8N9H8 876 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 MRGPRX4Q96LA9 322 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 B3GALT5Q9Y2C3 310 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 TBX19O60806 448 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 CLN5O75503 358 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
TCOF1-213ENST00000514442 SOSTQ9BQB4 213 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
TCOF1-213ENST00000514442 A0A1W2PPE2 198 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 PLGLAQ15195 96 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 TEX30Q5JUR7 227 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 SMIM15Q7Z3B0 74 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OR10G3Q8NGC4 313 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 PLA2G3Q9NZ20 509 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 A0A1B0GX12 115 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 C4orf47A7E2U8 309 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 E5RGE8 158 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OGG1O15527 345 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 VAMP5O95183 116 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 GRPP07492 148 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 MPGP29372 298 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 ERVK-16P61578 105 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 NSG2Q9Y328 171 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OR2M5A3KFT3 312 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 GCM2O75603 506 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 CDAP32320 146 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 SLC10A1Q14973 349 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 CARHSP1Q9Y2V2 147 aaKnown RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 KLF13Q9Y2Y9 288 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 SIRT4Q9Y6E7 314 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 A0A087WUJ7 227 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 A0A1W2PPV9 198 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 M0QZK8 103 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 SLC17A2O00624 439 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
TCOF1-213ENST00000514442 NXPH2O95156 264 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 TBXA2RP21731 343 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 THEM4Q5T1C6 240 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 UBE3DQ7Z6J8 389 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OR4S1Q8NGB4 309 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 HIST1H2BAQ96A08 127 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 TXN2Q99757 166 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 S1PR5Q9H228 398 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 RAB18Q9NP72 206 aa11.75□□□□□ -0.53
TCOF1-213ENST00000514442 OR6C6A6NF89 314 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 DNAJB12Q9NXW2 375 aaKnown RBP11.74□□□□□ -0.53
TCOF1-213ENST00000514442 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 CRHP06850 196 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 TAAR9Q96RI9 348 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 ALX4Q9H161 411 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-213ENST00000514442 OR5H15A6NDH6 313 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 OR5H1A6NKK0 313 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 CHRM2P08172 466 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 H2BFSP57053 126 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 NAAAQ02083 359 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 NMES1Q9C002 83 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 GPR84Q9NQS5 396 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 ANKUB1A6NFN9 424 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
TCOF1-213ENST00000514442 NTN1O95631 604 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 B4GALT1P15291 398 aa11.74□□□□□ -0.53
TCOF1-213ENST00000514442 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms