RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ABCG5Q9H222 651 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 DYNLRB1Q9NP97 96 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 G6PC2Q9NQR9 355 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 DDX28Q9NUL7 540 aaKnown RBP7.12□□□□□ -1.27
CCL28-204ENST00000514421 FAM206AQ9NX38 181 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 TAAR3PQ9P1P4 343 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 IKZF2Q9UKS7 526 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 FZR1Q9UM11 496 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 STARD10Q9Y365 291 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
CCL28-204ENST00000514421 RAI1Q7Z5J4 1906 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 A0A1W2PQ09 198 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 SMIM30A4D0T7 59 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 ACOD1A6NK06 481 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 F5H5K5 113 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 J3QW42 95 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 M0R233 179 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 GSTZ1O43708 216 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 SSX4O60224 188 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 RPP14O95059 124 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 EIF4EP06730 217 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 DBHP09172 617 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 UBCP0CG48 685 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 FOSL1P15407 271 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 IGFBP3P17936 291 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 ACHEP22303 614 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 RFX2P48378 723 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 MMP15P51511 669 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 TPTEP56180 551 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 ERVS71-1P61550 626 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 MFGE8Q08431 387 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 TAF13Q15543 124 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 KRTAP27-1Q3LI81 207 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 MBNL2Q5VZF2 373 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 FAM166AQ6J272 317 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 CFAP77Q6ZQR2 320 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 DNM1P46Q6ZS02 220 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 Q6ZSR3 168 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 LYPD6Q86Y78 171 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 ZCCHC24Q8N2G6 241 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 ZNF676Q8N7Q3 588 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 POC5Q8NA72 575 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 TRMT10AQ8TBZ6 339 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 KLF14Q8TD94 323 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 SPTSSAQ969W0 71 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 APOBEC3DQ96AK3 386 aaPredicted RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 Q96MF0 132 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 SYT3Q9BQG1 590 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 NEURL2Q9BR09 285 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 OR2J1Q9GZK6 312 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 MOB1AQ9H8S9 216 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 FOXJ3Q9UPW0 622 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 ETV7Q9Y603 341 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 V9GY05 133 aa7.11□□□□□ -1.27
CCL28-204ENST00000514421 TEP1Q99973 2627 aaKnown RBP7.11□□□□□ -1.27
CCL28-204ENST00000514421 TRAV8-7A0A075B6U6 113 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 LOC390937A0A1W2PQ73 354 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 ZNF878C9JN71 531 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 PLA2G10O15496 165 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 LCATP04180 440 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 ACSM4P0C7M7 580 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SLC2A2P11168 524 aaPredicted RBP7.1□□□□□ -1.27
CCL28-204ENST00000514421 CCL1P22362 96 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 OTX1P32242 354 aaPredicted RBP7.1□□□□□ -1.27
CCL28-204ENST00000514421 ALDH3B1P43353 468 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 PITPNBP48739 271 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 PSG7Q13046 419 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 P2RY14Q15391 338 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 NKPD1Q17RQ9 610 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 UBE2NLQ5JXB2 153 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SPATA46Q5T0L3 261 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 TMEM244Q5VVB8 128 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 ASPHD2Q6ICH7 369 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 PYHIN1Q6K0P9 492 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 ZNF529Q6P280 563 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 COLCA1Q6ZS62 124 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 RFPL4BQ6ZWI9 263 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 ELMOD2Q8IZ81 293 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 OR8H2Q8N162 312 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 Q8N402 240 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SAMD12Q8N8I0 201 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 DUSP18Q8NEJ0 188 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 OR4M1Q8NGD0 313 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 OR51A4Q8NGJ6 313 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 OR10AC1Q8NH08 325 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 RAB40AQ8WXH6 277 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 TRIM63Q969Q1 353 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 TMEM106AQ96A25 262 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 HAVCR1Q96D42 359 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 CMBLQ96DG6 245 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SLAMF6Q96DU3 332 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SORCS2Q96PQ0 1159 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 C1QTNF5Q9BXJ0 243 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 SLITRK2Q9H156 845 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 MYOZ1Q9NP98 299 aaPredicted RBP7.1□□□□□ -1.27
CCL28-204ENST00000514421 CENPMQ9NSP4 180 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 C14orf119Q9NWQ9 140 aa7.1□□□□□ -1.27
CCL28-204ENST00000514421 MYEF2Q9P2K5 600 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms