RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 DMRT1Q9Y5R6 373 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 PMS2P1A4D2B8 440 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 F8VVB4 439 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 F8VWA3 439 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 GABRR1P24046 479 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 SLC6A9P48067 706 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 PYY3Q5JQD4 70 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 OR2T2Q6IF00 324 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 PLXDC2Q6UX71 529 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 NUP54Q7Z3B4 507 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 ZFP62Q8NB50 900 aaPredicted RBP8.55□□□□□ -1.04
VCAN-210ENST00000513960 OR51E1Q8TCB6 317 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 SLC25A43Q8WUT9 341 aaPredicted RBP8.55□□□□□ -1.04
VCAN-210ENST00000513960 REEP6Q96HR9 211 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 ARHGAP5-AS1Q96IT6 56 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 KLHDC3Q9BQ90 382 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 SLC5A7Q9GZV3 580 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
VCAN-210ENST00000513960 SHISA7A6NL88 538 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 FREM3P0C091 2139 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 NDUFB7P17568 137 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 FBLP22087 321 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 SSTP61278 116 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 HSD11B2P80365 405 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF117Q03924 483 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 GAMTQ14353 236 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 LRRC75AQ8NAA5 344 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 THAP3Q8WTV1 239 aaPredicted RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF576Q9H609 170 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 C19orf12Q9NSK7 152 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 DOK5Q9P104 306 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 A0A087WZY1 265 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF850A8MQ14 1090 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 LMO7DNF2Z398 122 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 H3BML4 177 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 KLK2P20151 261 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 BLVRBP30043 206 aaPredicted RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 SULT1A2P50226 295 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 RPL27P61353 136 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 POU3F1Q03052 451 aaPredicted RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 CLEC12BQ2HXU8 276 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 PHLDA2Q53GA4 152 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF610Q8N9Z0 462 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 PRRX2Q99811 253 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 URM1Q9BTM9 101 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 RAB18Q9NP72 206 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 TMEM100Q9NV29 134 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 MRPL22Q9NWU5 206 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 MED29Q9NX70 200 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 R4GMQ9 66 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 TRAV36DV7A0A075B6V5 113 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 CDRT15L2A8MXV6 281 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 CYTIPO60759 359 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 SCAF4O95104 1147 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 IL2RAP01589 272 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 AFF3P51826 1226 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 CDCP2Q5VXM1 449 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 PARPBPQ9NWS1 579 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 CA14Q9ULX7 337 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 B3GALT5Q9Y2C3 310 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF587BE7ETH6 402 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 AGAP20933 346 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 PPP1CCP36873 323 aaKnown RBP8.54□□□□□ -1.04
VCAN-210ENST00000513960 OR1D5P58170 312 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 GFI1BQ5VTD9 330 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 C1orf189Q5VU69 101 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ASPHD2Q6ICH7 369 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 PLXDC1Q8IUK5 500 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 ZNF283Q8N7M2 679 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 NKAIN3Q8N8D7 197 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 RARRES2Q99969 163 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 C1orf123Q9NWV4 160 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 TREM2Q9NZC2 230 aa8.54□□□□□ -1.04
VCAN-210ENST00000513960 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 TAAR5O14804 337 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 SLC34A2O95436 690 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 DDAH2O95865 285 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 HKR1P10072 659 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 OR3A4PP47883 348 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 TSPO2Q5TGU0 170 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 OPN5Q6U736 354 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 CCDC54Q8NEL0 328 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 OR2AJ1Q8NGZ0 328 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ZNF721Q8TF20 911 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 AQP3Q92482 292 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 MR1Q95460 341 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ERGIC1Q969X5 290 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ADAT3Q96EY9 351 aaPredicted RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 SMIM8Q96KF7 97 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 ZNF2Q9BSG1 426 aaPredicted RBP8.53□□□□□ -1.04
VCAN-210ENST00000513960 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 SH3BGRL3Q9H299 93 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 PARP11Q9NR21 331 aa8.53□□□□□ -1.04
VCAN-210ENST00000513960 VDAC3Q9Y277 283 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms