RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CRISP1P54107 249 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 POU4F2Q12837 409 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 KLRD1Q13241 179 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 ZIK1Q3SY52 487 aaPredicted RBP11.33□□□□□ -0.6
SPCS3-204ENST00000513139 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 ZNF826PQ6ZT77 177 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 FGFRL1Q8N441 504 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 LNX2Q8N448 690 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 OR2T33Q8NG76 320 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 OR51G2Q8NGK0 314 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 EME1Q96AY2 570 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 C12orf43Q96C57 262 aaKnown RBP11.33□□□□□ -0.6
SPCS3-204ENST00000513139 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 PITX2Q99697 317 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 METTL8Q9H825 291 aaKnown RBP11.33□□□□□ -0.6
SPCS3-204ENST00000513139 RNPEPL1Q9HAU8 725 aa11.33□□□□□ -0.6
SPCS3-204ENST00000513139 IGHV3OR15-7A0A075B7D8 119 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 OR6C68A6NDL8 312 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 NDUFB3O43676 98 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 IDH3BO43837 385 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 GRPP07492 148 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 CD28P10747 220 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 GRK5P34947 590 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 TGM4P49221 684 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 ALDH3A2P51648 485 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 TPTEP56180 551 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 CDK5Q00535 292 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 PTGES3Q15185 160 aaKnown RBP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 MEP1BQ16820 701 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 PCK2Q16822 640 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 WDR38Q5JTN6 314 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 ATPAF1Q5TC12 328 aaPredicted RBP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 DNM1P34Q6PK57 102 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 NAA40Q86UY6 237 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 PNKDQ8N490 385 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 CYB561A3Q8NBI2 242 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 WIPF2Q8TF74 440 aaPredicted RBP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 TSSK2Q96PF2 358 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 CCL13Q99616 98 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 FN3KQ9H479 309 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 RIBC2Q9H4K1 309 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 USE1Q9NZ43 259 aa11.32□□□□□ -0.6
SPCS3-204ENST00000513139 RRP15Q9Y3B9 282 aaKnown RBP11.32□□□□□ -0.6
SPCS3-204ENST00000513139 A0A1B0GW55 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 GGT3PA6NGU5 568 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DCTN6O00399 190 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L2P0CJ85 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L3P0CJ86 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L4P0CJ87 422 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L5P0CJ88 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L6P0CJ89 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L7P0CJ90 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 FAHP16930 419 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 CD33P20138 364 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 PEX2P28328 305 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 GGT2P36268 569 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DLX1P56177 255 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 ESRRGP62508 458 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 ZNF92Q03936 586 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SLC34A1Q06495 639 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 LY6EQ16553 131 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4L9Q6RFH8 374 aaPredicted RBP11.31□□□□□ -0.6
SPCS3-204ENST00000513139 Q8N2B8 174 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SLC37A3Q8NCC5 494 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 MBOAT4Q96T53 435 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DDOQ99489 341 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SRA1Q9HD15 236 aaKnown RBP11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 BAIAP2Q9UQB8 552 aa11.31□□□□□ -0.6
SPCS3-204ENST00000513139 SF3B6Q9Y3B4 125 aaKnown RBP11.31□□□□□ -0.6
SPCS3-204ENST00000513139 IGLV1-36A0A0B4J1U3 117 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 M0R129 80 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 IGLL1P15814 213 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 CENPAP49450 140 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 BLMHQ13867 455 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 CRMP1Q14194 572 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 CCBE1Q6UXH8 406 aaPredicted RBP11.3□□□□□ -0.6
SPCS3-204ENST00000513139 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
SPCS3-204ENST00000513139 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 OR6V1Q8N148 313 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
SPCS3-204ENST00000513139 ZNRF4Q8WWF5 429 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms