RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RIBC2Q9H4K1 309 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TBC1D23Q9NUY8 699 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 ONECUT1Q9UBC0 465 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4Q9UBX2 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 MYRFQ9Y2G1 1151 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TEX13CA0A0J9YWL9 993 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 A0A1W2PRG6 482 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 H7C1C5 153 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 LGALS8O00214 317 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 DVL1O14640 695 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 ARPC3O15145 178 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 HLA-DPB1P04440 258 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 HIST1H1CP16403 213 aaKnown RBP7.37□□□□□ -1.23
NUP54-211ENST00000512151 GRK5P34947 590 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 HTR5AP47898 357 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 LCN6P62502 163 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 ESRRGP62508 458 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 EFNB1P98172 346 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 MAB21L1Q13394 359 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 MPPED2Q15777 294 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 PRAMEF6Q5VXH4 476 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 SLX4IPQ5VYV7 408 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 C12orf73Q69YU5 71 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 RPL13AP3Q6NVV1 102 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 SATL1Q86VE3 508 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 LNX2Q8N448 690 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 BOLLQ8N9W6 283 aaKnown RBP7.37□□□□□ -1.23
NUP54-211ENST00000512151 LY6G5BQ8NDX9 201 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 TSPAN14Q8NG11 270 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 OR8G5Q8NG78 346 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 TEX47Q8TBZ9 253 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 Q8TCH9 128 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 ZNRF4Q8WWF5 429 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 NSMAFQ92636 917 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 RCHY1Q96PM5 261 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 TSC22D3Q99576 134 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 YTHDF1Q9BYJ9 559 aaKnown RBP7.37□□□□□ -1.23
NUP54-211ENST00000512151 SLC25A19Q9HC21 320 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 UFSP2Q9NUQ7 469 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 TBCCD1Q9NVR7 557 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 FAM118AQ9NWS6 357 aa7.37□□□□□ -1.23
NUP54-211ENST00000512151 NPIPB13A6NJU9 1138 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 NPIPB4C9JG80 1138 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 M0R129 80 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 AHCYL1O43865 530 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 CLIC3O95833 236 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 LHBP01229 141 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 GYPAP02724 150 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 SCG5P05408 212 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 FAHP16930 419 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 EEF1B2P24534 225 aaKnown RBP7.36□□□□□ -1.23
NUP54-211ENST00000512151 LAP3P28838 519 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 SDHAP31040 664 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 GATA4P43694 442 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 ALDH3B2P48448 385 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 RPS6KA3P51812 740 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 RAD23AP54725 363 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.36□□□□□ -1.232e-6■□□□□ 10.7
NUP54-211ENST00000512151 POU4F2Q12837 409 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 KRR1Q13601 381 aaKnown RBP7.36□□□□□ -1.23
NUP54-211ENST00000512151 ENDOGQ14249 297 aaKnown RBP7.36□□□□□ -1.23
NUP54-211ENST00000512151 CNPY1Q3B7I2 92 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 FAM27BQ5VT28 67 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 HCP5Q6MZN7 132 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 SLC37A3Q8NCC5 494 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 OR2T33Q8NG76 320 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 OR52L1Q8NGH7 329 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 OR13G1Q8NGZ3 307 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 OR4K13Q8NH42 304 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 ST8SIA4Q92187 359 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 SLC7A6Q92536 515 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 PTP4A1Q93096 173 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 DGCR14Q96DF8 476 aaKnown RBP7.36□□□□□ -1.23
NUP54-211ENST00000512151 HRASLS5Q96KN8 279 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 PRR25Q96S07 402 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 NMNAT3Q96T66 252 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 HCAR1Q9BXC0 346 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 CDCA4Q9BXL8 241 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 RBM38Q9H0Z9 239 aaKnown RBP7.36□□□□□ -1.23
NUP54-211ENST00000512151 FN3KQ9H479 309 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 GRHPRQ9UBQ7 328 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 AASSQ9UDR5 926 aa7.36□□□□□ -1.23
NUP54-211ENST00000512151 A0A087WXM4 84 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 LOC100130705A0A1B0GUX0 176 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 A0A1B0GWJ7 208 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 OR6C68A6NDL8 312 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 DCTN6O00399 190 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 SLC16A6O15403 523 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 IDH3BO43837 385 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 CST2P09228 141 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 GNAO1P09471 354 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 IRF2P14316 349 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 RAC2P15153 192 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 GGT2P36268 569 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 DAP3P51398 398 aaKnown RBP7.35□□□□□ -1.23
NUP54-211ENST00000512151 GUCA2AQ02747 115 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 CRMP1Q14194 572 aa7.35□□□□□ -1.23
NUP54-211ENST00000512151 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms