RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 H1FOOQ8IZA3 346 aaPredicted RBP7.57□□□□□ -1.2
HTT-208ENST00000510626 BCORP1Q8N888 145 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 PFN4Q8NHR9 129 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 PELI1Q96FA3 418 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 AAMDCQ9H7C9 122 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 TMEM9BQ9NQ34 198 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 GABRQQ9UN88 632 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 SLC17A4Q9Y2C5 497 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 MYLKQ15746 1914 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 SIGLEC1Q9BZZ2 1709 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 DCDP81605 110 aaKnown RBP7.57□□□□□ -1.2
HTT-208ENST00000510626 IER5LQ5T953 404 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 LCN15Q6UWW0 184 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 NLGN4XQ8N0W4 816 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 PBOV1Q9GZY1 135 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 FRG2CA6NGY1 282 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 CDX1P47902 265 aaPredicted RBP7.57□□□□□ -1.2
HTT-208ENST00000510626 CLDN17P56750 224 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 SRYQ05066 204 aa7.57□□□□□ -1.2
HTT-208ENST00000510626 SLC17A3O00476 420 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 DCTDP32321 178 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEM268Q5VZI3 342 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 NSUN5P2Q63ZY6 315 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 ARRDC3Q96B67 414 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 GALMQ96C23 342 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PCDHGA9Q9Y5G4 932 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FAM180BQ6P0A1 224 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PRSS54Q6PEW0 395 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PTOV1Q86YD1 416 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 MFRPQ9BY79 579 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CCSO14618 274 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CD22P20273 847 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 ASB5Q8WWX0 329 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 LINC00615Q96LM1 132 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 GPR84Q9NQS5 396 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 UQCR10Q9UDW1 63 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CYR61O00622 381 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SFT2D2O95562 160 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 B2MP61769 119 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FBXW5Q969U6 566 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 EID2BQ96D98 161 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 HIST1H1DP16402 221 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 BRS3P32247 399 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FAM3AP98173 230 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 LINC00596Q86U02 117 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEM25Q86YD3 366 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SMG9Q9H0W8 520 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 MIXL1Q9H2W2 232 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CTSFQ9UBX1 484 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 ITGB4P16144 1822 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SPNP16150 400 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 MUC20Q8N307 709 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 OR52N4Q8NGI2 321 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SLAMF6Q96DU3 332 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CACNG4Q9UBN1 327 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FTSJ1Q9UET6 329 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEFF2Q9UIK5 374 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 CTAG2O75638 210 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SAPCD1Q5SSQ6 148 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PRAMEF5Q5TYX0 476 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PRAMEF6Q5VXH4 476 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 NTNG1Q9Y2I2 539 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 LSM2Q9Y333 95 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 CTSDP07339 412 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 PRSS56P0CW18 603 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 MRGPRGQ86SM5 289 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 SLC16A11Q8NCK7 471 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 CHODLQ9H9P2 273 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEM272A0A1B0GTI8 110 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FCN1O00602 326 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 HPP00738 406 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 PPICP45877 212 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 RHOBP62745 196 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 LRP11Q86VZ4 500 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TP53INP2Q8IXH6 220 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 KCNK7Q9Y2U2 307 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 MPDU1O75352 247 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 FAM109BQ6ICB4 259 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 ADAT1Q9BUB4 502 aaKnown RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 PLEKHB1Q9UF11 243 aaPredicted RBP7.56□□□□□ -1.2
HTT-208ENST00000510626 OPN4Q9UHM6 478 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 C1SP09871 688 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 AWAT1Q58HT5 328 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 USP53Q70EK8 1073 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 TMEM167BQ9NRX6 74 aa7.56□□□□□ -1.2
HTT-208ENST00000510626 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 IRF3Q14653 427 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 USB1Q9BQ65 265 aaKnown RBP7.55□□□□□ -1.2
HTT-208ENST00000510626 SGIP1Q9BQI5 828 aa7.55□□□□□ -1.2
HTT-208ENST00000510626 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms