RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 A0A1W2PQ09 198 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 TIMM23O14925 209 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 FAM107AO95990 144 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 PAHP00439 452 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 TFF1P04155 84 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 FBP1P09467 338 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 ANXA8P13928 327 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 SELLP14151 372 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 AMY2BP19961 511 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 GLRA1P23415 457 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 MAP2K3P46734 347 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 CDK5Q00535 292 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 APOFQ13790 326 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 TMEM236Q5W0B7 351 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 THAP5Q7Z6K1 395 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 SPATA24Q86W54 205 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 PAPD5Q8NDF8 572 aaKnown RBP12.65□□□□□ -0.38
TPM3-219ENST00000509409 DMRTB1Q96MA1 342 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 C1orf21Q9H246 121 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 SEMA6AQ9H2E6 1030 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 YY1AP1Q9H869 796 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 NLKQ9UBE8 527 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 KLHDC2Q9Y2U9 406 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 CMYA5Q8N3K9 4069 aa12.65□□□□□ -0.38
TPM3-219ENST00000509409 ZNF816-ZNF321PA0A0X1KG74 233 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 TMEM269A0A1B0GVZ9 245 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 ZNF732B4DXR9 585 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 M0QZ24 198 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 PSMD9O00233 223 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 NPFFO15130 113 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 GSC2O15499 205 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 HOXB6P17509 224 aaKnown RBP12.64□□□□□ -0.39
TPM3-219ENST00000509409 ALOX5APP20292 161 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 DLX1P56177 255 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
TPM3-219ENST00000509409 KLRD1Q13241 179 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 BLMHQ13867 455 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 DGUOKQ16854 277 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 MIDNQ504T8 468 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 FAM76BQ5HYJ3 339 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 CEP78Q5JTW2 689 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
TPM3-219ENST00000509409 ZNF788Q6ZQV5 615 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 MOB3CQ70IA8 216 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 LINC01006Q8NI28 216 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 ANGPTL6Q8NI99 470 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 ZNF671Q8TAW3 534 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 GAFA1Q96PS6 74 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 CITED1Q99966 193 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 YIPF3Q9GZM5 350 aa12.64□□□□□ -0.39
TPM3-219ENST00000509409 FGF23Q9GZV9 251 aaPredicted RBP12.64□□□□□ -0.39
TPM3-219ENST00000509409 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 ACOD1A6NK06 481 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 OR2AT4A6NND4 320 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 RNASEK-C17orf49H0YIS7 233 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 SIGLEC5O15389 551 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 MRPL3P09001 348 aaKnown RBP12.63□□□□□ -0.39
TPM3-219ENST00000509409 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
TPM3-219ENST00000509409 CAPZA1P52907 286 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 GNG3P63215 75 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 CBX1P83916 185 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 CEACAM21Q3KPI0 293 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
TPM3-219ENST00000509409 METAP1DQ6UB28 335 aaPredicted RBP12.63□□□□□ -0.39
TPM3-219ENST00000509409 Q8N7P7 452 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 C8orf46Q8TAG6 207 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 HPSE2Q8WWQ2 592 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 TEAD3Q99594 435 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 MROQ9BYG7 248 aa12.63□□□□□ -0.39
TPM3-219ENST00000509409 M0R1W7 72 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 GYG2O15488 501 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 RHBDL1O75783 438 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 KRTAP10-3P60369 221 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 RIPPLY1Q0D2K3 151 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 FLOT2Q14254 428 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 TAF9Q16594 264 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 PDLIM3Q53GG5 364 aaPredicted RBP12.62□□□□□ -0.39
TPM3-219ENST00000509409 DMRTC1Q5HYR2 192 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 LCN1P1Q5VSP4 162 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 NCR3LG1Q68D85 454 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 PNKDQ8N490 385 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 ZSCAN4Q8NAM6 433 aaPredicted RBP12.62□□□□□ -0.39
TPM3-219ENST00000509409 TMEM185AQ8NFB2 350 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 OR5A2Q8NGI9 324 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 OR51E1Q8TCB6 317 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 UBE2FQ969M7 185 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
TPM3-219ENST00000509409 PBOV1Q9GZY1 135 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 OR51I2Q9H344 312 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 SLC25A19Q9HC21 320 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
TPM3-219ENST00000509409 IKZF2Q9UKS7 526 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms