RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM187Q14656 261 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RAB6CQ53S08 254 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 N4BP2L1Q5TBK1 243 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FAM72AQ5TYM5 149 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FAM72DQ6L9T8 149 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 GCNT7Q6ZNI0 430 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 C6orf120Q7Z4R8 191 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 MRGPRGQ86SM5 289 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ADGRE4PQ86SQ3 457 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FAM72BQ86X60 149 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR52N1Q8NH53 320 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR2T6Q8NHC8 308 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ADAMTS17Q8TE56 1095 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SNRNP40Q96DI7 357 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ATF6BQ99941 703 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PARD6GQ9BYG4 376 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RAB6CQ9H0N0 254 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RPF2Q9H7B2 306 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF701Q9NV72 531 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ARMCX1Q9P291 453 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF281Q9Y2X9 895 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SNX11Q9Y5W9 270 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 F8W036 122 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PRYO14603 147 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FGF2P09038 288 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 GLI4P10075 376 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 HMGA1P17096 107 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 GATA3P23771 443 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ELK4P28324 431 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 EMP2P54851 167 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 MAZP56270 477 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RBM11P57052 281 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 DNAJB13P59910 316 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF155Q12901 538 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 BCL2A1Q16548 175 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 MED27Q6P2C8 311 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 GCSAMQ8N6F7 178 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 NPWQ8N729 165 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR2AE1Q8NHA4 323 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 CMTM7Q96FZ5 175 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OCIAD1Q9NX40 245 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TECRQ9NZ01 308 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SLC17A4Q9Y2C5 497 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 WIPI2Q9Y4P8 454 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR5H15A6NDH6 313 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ANTXRLA6NF34 631 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PROB1E7EW31 1015 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 M0QXV9 152 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR7A17O14581 309 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RAMP2O60895 175 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SEMA7AO75326 666 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 CST4P01036 141 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FCGR3AP08637 254 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FUT3P21217 361 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PAX6P26367 422 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ADMP35318 185 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR3A1P47881 315 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TAF10Q12962 218 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 GNMTQ14749 295 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PTGES3Q15185 160 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PSG3Q16557 428 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PAGE3Q5JUK9 113 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RBM44Q6ZP01 1051 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PRSS48Q7RTY5 328 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PPP1R32Q7Z5V6 425 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 NIT1Q86X76 327 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 KIR3DL3Q8N743 410 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 BAALCQ8WXS3 180 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 LRRC58Q96CX6 371 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 DDIT4LQ96D03 193 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 VWCEQ96DN2 955 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 EFCAB11Q9BUY7 163 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 C1orf50Q9BV19 199 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ANKRD19PQ9H560 264 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 KCNE5Q9UJ90 142 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PKIGQ9Y2B9 76 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 UFC1Q9Y3C8 167 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SHROOM3Q8TF72 1996 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ANHXE9PGG2 379 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ARPC1BO15143 372 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF749O43361 778 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CD74P04233 296 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 C8BP07358 591 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RFPL3SP0C7P2 107 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CXCR1P25024 350 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR1E1P30953 314 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 CFHR2P36980 270 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 SLC35A1P78382 337 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TSPAN31Q12999 210 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TIMM50Q3ZCQ8 353 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 FRG2Q64ET8 278 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 KCTD16Q68DU8 428 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM200BQ69YZ2 307 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR13D1Q8NGV5 346 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR51Q1Q8NH59 317 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OR10A6Q8NH74 314 aa3.43□□□□□ -1.86
NEDD4-209ENST00000508871 OCC1Q8TAD7 63 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms