RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 COMMD7Q86VX2 200 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 C10orf107Q8IVU9 208 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 BPIFB2Q8N4F0 458 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF283Q8N7M2 679 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 GATD1Q8NB37 220 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 GNPDA2Q8TDQ7 276 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 OXGR1Q96P68 337 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 RCHY1Q96PM5 261 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 CMSS1Q9BQ75 279 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM96AQ9H5X1 160 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 SDR39U1Q9NRG7 319 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 GNG8Q9UK08 70 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 CHD5Q8TDI0 1954 aa6.39□□□□□ -1.39
PDGFRA-206ENST00000508170 MYH6P13533 1939 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 CEACAM18A8MTB9 384 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TRAPPC2LH3BP13 241 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 EEDO75530 441 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 PTTG1O95997 202 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 CYBAP13498 195 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 GABRG2P18507 467 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 CBLP22681 906 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 AK4P27144 223 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 BTG1P62324 171 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TCP10Q12799 353 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 HNRNPA0Q13151 305 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 HIST3H3Q16695 136 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 AWAT1Q58HT5 328 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ALG10Q5BKT4 473 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ALG10BQ5I7T1 473 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TMEM215Q68D42 235 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF567Q8N184 647 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OR4X1Q8NH49 305 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 NODALQ96S42 347 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF670Q9BS34 389 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 AGMATQ9BSE5 352 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TRAF4Q9BUZ4 470 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TAPBPLQ9BX59 468 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 DCSTAMPQ9H295 470 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 FBXL4Q9UKA2 621 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 DOT1LQ8TEK3 1739 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 KIR2DS5A0A0G2JLQ3 304 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 A0A0G2JNG1 304 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 EXOC1LA0A1B0GW35 172 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 DAPL1A0PJW8 107 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OR5H14A6NHG9 310 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ORC5O43913 435 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 UGT2B11O75310 529 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 MT-CO3P00414 261 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OAS1P00973 400 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OR13C7P0DN81 318 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ACRV1P26436 265 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 RPS14P62263 151 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ST3GAL4Q11206 333 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 KIR2DS5Q14953 304 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OR8G1Q15617 311 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF630Q2M218 657 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 DCAF10Q5QP82 559 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM27D1Q5T7N8 215 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 C12orf54Q6X4T0 127 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 RASSF6Q6ZTQ3 369 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 DOLPP1Q86YN1 238 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 PIK3R3Q92569 461 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 ZMYND19Q96E35 227 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 P2RY11Q96G91 374 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 MS4A4EQ96PG1 132 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 FCRL5Q96RD9 977 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 GINS3Q9BRX5 216 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 RSPO3Q9BXY4 272 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TEX101Q9BY14 249 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 TBL1XR1Q9BZK7 514 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 A4GALTQ9NPC4 353 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 SNX11Q9Y5W9 270 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 LAMB2P55268 1798 aa6.38□□□□□ -1.39
PDGFRA-206ENST00000508170 GMNCA6NCL1 334 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 OR5B21A6NL26 309 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 TRIM49D1C9J1S8 452 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PRRG2O14669 202 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PCSK6P29122 969 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 CASP1P29466 404 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 FBXW4P57775 412 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PFN3P60673 137 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 C1QTNF8P60827 252 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 GAGE5Q13069 117 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 GAGE6Q13070 117 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 OR52E8Q6IFG1 317 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PAMR1Q6UXH9 720 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PGBD5Q8N414 524 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 GABRG3Q99928 467 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 RASL11BQ9BPW5 248 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PDCD1LG2Q9BQ51 273 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 THYN1Q9P016 225 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 COPZ2Q9P299 210 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 IL36AQ9UHA7 158 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 GLS2Q9UI32 602 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 CICQ96RK0 1608 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 RREB1Q92766 1687 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms