RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ISL1P61371 349 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 LMO4P61968 165 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 ALKBH1Q13686 389 aaKnown RBP8.3□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF404Q494X3 552 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 RPL22L1Q6P5R6 122 aaKnown RBP8.3□□□□□ -1.08
NR1I3-220ENST00000505005 BCDIN3DQ7Z5W3 292 aaKnown RBP8.3□□□□□ -1.08
NR1I3-220ENST00000505005 DNAAF1Q8NEP3 725 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 OR1M1Q8NGA1 313 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 OR5D14Q8NGL3 314 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 MYDGFQ969H8 173 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 MSI2Q96DH6 328 aaKnown RBP8.3□□□□□ -1.08
NR1I3-220ENST00000505005 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 TBX5Q99593 518 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 PCDHB16Q9NRJ7 776 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 C1orf123Q9NWV4 160 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 ERVK13-1Q9NX77 482 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 UBAP1Q9NZ09 502 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 KAAG1Q9UBP8 84 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 SCOCQ9UIL1 159 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 DIMT1Q9UNQ2 313 aaKnown RBP8.3□□□□□ -1.08
NR1I3-220ENST00000505005 ERGIC3Q9Y282 383 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 KLHDC2Q9Y2U9 406 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 RHBDD3Q9Y3P4 386 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 PCDHGB5Q9Y5G0 923 aa8.3□□□□□ -1.08
NR1I3-220ENST00000505005 CR1P17927 2039 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ACANP16112 2415 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 A0A1W2PPH5 198 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 OOEPA6NGQ2 149 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 TRIM64CA6NLI5 447 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF850A8MQ14 1090 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 A8MXK9 166 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 J3QLW9 94 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PSMD9O00233 223 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 SRSF10O75494 262 aaKnown RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PNPP00491 289 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 LHBP01229 141 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 GNAO1P09471 354 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 FAM157CP0CG43 387 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PSKH1P11801 424 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 RPS2P15880 293 aaKnown RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF19P17023 458 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 BMXP51813 675 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ATP1B3P54709 279 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 GNB2P62879 340 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF85Q03923 595 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 BLMHQ13867 455 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 DCAF12L2Q5VW00 463 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 RNLSQ5VYX0 342 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 TEX36Q5VZQ5 186 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PLCXD3Q63HM9 321 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 TMEM42Q69YG0 159 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 MOB3CQ70IA8 216 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 UTS2BQ765I0 119 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 SERPINA12Q8IW75 414 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 MKXQ8IYA7 352 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 STX19Q8N4C7 294 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF676Q8N7Q3 588 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 PNLDC1Q8NA58 520 aaKnown RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 OR14K1Q8NGZ2 314 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 OR2G2Q8NGZ5 317 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 OR52N1Q8NH53 320 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 OR5AK2Q8NH90 309 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 RORBQ92753 470 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 SPSB1Q96BD6 273 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 BORCS8Q96FH0 119 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 FAM71F1Q96KD3 344 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 C4orf36Q96KX1 117 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 SOX7Q9BT81 388 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 MRI1Q9BV20 369 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 SSBP3Q9BWW4 388 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
NR1I3-220ENST00000505005 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 DNAJB11Q9UBS4 358 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 CLN8Q9UBY8 286 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 GLS2Q9UI32 602 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
NR1I3-220ENST00000505005 A0A0A6YYJ9 748 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 TRBV2A0A0J9YWF9 115 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 ANKRD61A6NGH8 418 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 SRRM5B3KS81 715 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 H0YL77 283 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 H3BUI4 141 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 M0R129 80 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 MYL12BO14950 172 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 NOS1APO75052 506 aaPredicted RBP8.28□□□□□ -1.08
NR1I3-220ENST00000505005 WNT2P09544 360 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 SRD5A1P18405 259 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 SRP14P37108 136 aaKnown RBP8.28□□□□□ -1.08
NR1I3-220ENST00000505005 RBP2P50120 134 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 ZNF154Q13106 437 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 SMIM21Q3B7S5 101 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 LRRC10Q5BKY1 277 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
NR1I3-220ENST00000505005 ATPAF1Q5TC12 328 aaPredicted RBP8.28□□□□□ -1.08
NR1I3-220ENST00000505005 LHFPL2Q6ZUX7 228 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms