RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LOXL1Q08397 574 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 MZT1Q08AG7 82 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 CEACAM21Q3KPI0 293 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 C11orf53Q8IXP5 236 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 BOLLQ8N9W6 283 aaKnown RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 RPS4Y2Q8TD47 263 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 HAVCR2Q8TDQ0 301 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 NPRL2Q8WTW4 380 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 RGP1Q92546 391 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 TIMD4Q96H15 378 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 OR5M11Q96RB7 305 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 MND1Q9BWT6 205 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 METTL17Q9H7H0 456 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 NPTNQ9Y639 398 aa13.88□□□□□ -0.19
SCLT1-205ENST00000503401 ANK3Q12955 4377 aaKnown RBP13.88□□□□□ -0.19
SCLT1-205ENST00000503401 ANKRD61A6NGH8 418 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 OGG1O15527 345 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 CDH15P55291 814 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 IRF3Q14653 427 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 UBE2V2Q15819 145 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 OR13C5Q8NGS8 318 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 TRMT10AQ8TBZ6 339 aaKnown RBP13.87□□□□□ -0.19
SCLT1-205ENST00000503401 Q8TCH9 128 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
SCLT1-205ENST00000503401 RAB1CQ92928 201 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 SMIM19Q96E16 107 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 GSX1Q9H4S2 264 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-205ENST00000503401 ABCB9Q9NP78 766 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 MTORP42345 2549 aa13.87□□□□□ -0.19
SCLT1-205ENST00000503401 LRRC30A6NM36 301 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 C3orf80F5H4A9 247 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CDIPTO14735 213 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 IRF2P14316 349 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ZNF12P17014 697 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ZNF20P17024 532 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 MAP2K4P45985 399 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 SOX2P48431 317 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 BTG1P62324 171 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ZMYND11Q15326 602 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 MED22Q15528 200 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 DMKNQ6E0U4 476 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-205ENST00000503401 PEG10Q86TG7 708 aaKnown RBP13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CCDC54Q8NEL0 328 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 OR11L1Q8NGX0 322 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CLDND2Q8NHS1 167 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ERGIC1Q969X5 290 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CHST5Q9GZS9 411 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 BLOC1S6Q9UL45 172 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
SCLT1-205ENST00000503401 MALRD1Q5VYJ5 2156 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 IGHV2-70P01814 119 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CELP19835 753 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 CHN2P52757 468 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 GMFBP60983 142 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 GNG3P63215 75 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ZNF181Q2M3W8 571 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 TMEM249Q2WGJ8 235 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 FAM76BQ5HYJ3 339 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 SCCPDHQ8NBX0 429 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 OR5A2Q8NGI9 324 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 GHSRQ92847 366 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 HPS1Q92902 700 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 PGLYRP3Q96LB9 341 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 RNF7Q9UBF6 113 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 DHDHQ9UQ10 334 aa13.86□□□□□ -0.19
SCLT1-205ENST00000503401 ARHGAP32A7KAX9 2087 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.85□□□□□ -0.192e-8■■■■□ 24.1
SCLT1-205ENST00000503401 FAM230AA0A1W2PPH8 454 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 TMEM210A6NLX4 147 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 IFNL4K9M1U5 179 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 EGR1P18146 543 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 CD80P33681 288 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 SPHARQ15513 63 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 SFRP4Q6FHJ7 346 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-205ENST00000503401 WDR82Q6UXN9 313 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 C1orf87Q8N0U7 546 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 DEFB108BQ8NET1 73 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 LRRC29Q8WV35 223 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 GAL3ST1Q99999 423 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 TLNRD1Q9H1K6 362 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 OR51I2Q9H344 312 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 ZNF281Q9Y2X9 895 aa13.85□□□□□ -0.19
SCLT1-205ENST00000503401 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 RHBDL1O75783 438 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 GATBO75879 557 aaKnown RBP13.84□□□□□ -0.19
SCLT1-205ENST00000503401 SERPINA3P01011 423 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 FOSL1P15407 271 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 TAS2R43P59537 309 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-205ENST00000503401 Q71RC1 249 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-205ENST00000503401 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 GPR148Q8TDV2 347 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 PP6455Q8WZ26 134 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 C10orf35Q96D05 121 aa13.84□□□□□ -0.19
SCLT1-205ENST00000503401 PPIAL4EA0A075B759 164 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms