RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 ZNF649Q9BS31 505 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF2Q9BSG1 426 aaPredicted RBP4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 VN1R1Q9GZP7 353 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 DYNLRB1Q9NP97 96 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 MANBALQ9NQG1 85 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 OR5V1Q9UGF6 321 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 A0A0U1RQS6 177 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ZFPL1O95159 310 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 CRHP06850 196 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 GCSHP23434 173 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 SLC37A1P57057 533 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF121P58317 390 aaPredicted RBP4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 SQSTM1Q13501 440 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 EXOSC2Q13868 293 aaKnown RBP4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF239Q16600 458 aaKnown RBP4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 WDR38Q5JTN6 314 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 NLRC3Q7RTR2 1065 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ASCL5Q7RTU5 278 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEFF1Q8IYR6 380 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 CLRN3Q8NCR9 226 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 OR5A2Q8NGI9 324 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 OR2G3Q8NGZ4 309 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 UBE2FQ969M7 185 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 MACROD1Q9BQ69 325 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 PLA2G12AQ9BZM1 189 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 TWSG1Q9GZX9 223 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 FN3KRPQ9HA64 309 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 OR6C3Q9NZP0 311 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 OR14J1Q9UGF5 321 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 B3GALT1Q9Y5Z6 326 aa4.24□□□□□ -1.73
NDFIP1-202ENST00000503388 ELOA3CA0A087WX78 387 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 FAM227AF5H4B4 570 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MKRN2OSH3BPM6 223 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MPDU1O75352 247 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MELTFP08582 738 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 PSG6Q00889 435 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MYBPHQ13203 477 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 KLF9Q13886 244 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 INO80CQ6PI98 192 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 HMGN2P46Q86SG4 172 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 ZNF761Q86XN6 746 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 C20orf196Q8IYI0 205 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 PNPLA1Q8N8W4 532 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 PLPP7Q8NBV4 271 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 OR13G1Q8NGZ3 307 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 FAM213BQ8TBF2 198 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MITD1Q8WV92 249 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 SECTM1Q8WVN6 248 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 GALMQ96C23 342 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 MENTQ9BUN1 341 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 NAA60Q9H7X0 242 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 SLC6A13Q9NSD5 602 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 NTNG1Q9Y2I2 539 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 AMMECR1Q9Y4X0 333 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 HRH3Q9Y5N1 445 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 NUP210LQ5VU65 1888 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 A0A1B0GVG6 124 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 OR6C68A6NDL8 312 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 PPP5D1E7EU14 171 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 H7BYZ3 331 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 K7EQS6 105 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 CD3DP04234 171 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 ASAH2BP0C7U1 165 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 FGF5P12034 268 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 VDAC1P21796 283 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 UCP3P55916 312 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 AANATQ16613 207 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 LINC00303Q3SY05 128 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 PSMG4Q5JS54 123 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 RPUSD3Q6P087 351 aaKnown RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 TEX29Q8N6K0 151 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 DMBX1Q8NFW5 382 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 STXBP6Q8NFX7 210 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 OR4S1Q8NGB4 309 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 OR1L6Q8NGR2 347 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 TVP23CQ96ET8 276 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 TMEM56Q96MV1 263 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 TSPAN32Q96QS1 320 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 ARV1Q9H2C2 271 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 HRH4Q9H3N8 390 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 GPR173Q9NS66 373 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 A0A1B0GU03 582 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 C9orf170A2RU37 121 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 SLC22A20A6NK97 555 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 FAM74A7A6NL05 159 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 HRO43593 1189 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 CLDN1O95832 211 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 EFEMP2O95967 443 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 FGF2P09038 288 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 GZMHP20718 246 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 NKX2-5P52952 324 aaPredicted RBP4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 UCNP55089 124 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 P2RX3P56373 397 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 CAV3P56539 151 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 KISS1Q15726 138 aa4.23□□□□□ -1.73
NDFIP1-202ENST00000503388 KCNMB1Q16558 191 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms