RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 A0A1B0GUA9 196 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM240AA0A1B0GVK7 77 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC5A10A0PJK1 596 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ISPDA4D126 451 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 A6NDX4 124 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 C9J4A7 227 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 FTCDNL1E5RQL4 147 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KRTAP4-16G5E9R7 235 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 H3BNH8 94 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GPR171O14626 319 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TCAPO15273 167 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SSNA1O43805 119 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 MPZL2O60487 215 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SHOX2O60902 331 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CTNSO60931 367 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB3DO95716 219 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 MOSP00540 346 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 P01737 135 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRB2P02812 416 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RLN2P04090 185 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CTXN2P0C2S0 81 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC35G6P0C7Q6 338 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 LIMS3P0CW19 117 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 LIMS4P0CW20 117 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR5H8P0DN80 308 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 HSPD1P10809 573 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 THRAP10827 490 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 MLNP12872 115 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF35P13682 527 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 NQO1P15559 274 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TCP1P17987 556 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CELP19835 753 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB3BP20337 219 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 F8A1P23610 371 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSMB5P28074 263 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 HTR1DP28221 377 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GTF2H1P32780 548 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 COILP38432 576 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TUFMP49411 452 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 UBE2E1P51965 193 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RND2P52198 227 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAP1GDS1P52306 607 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 NKX2-5P52952 324 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 AQP5P55064 265 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 VSX2P58304 361 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TAS2R31P59538 309 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 B2MP61769 119 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC35A1P78382 337 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRR3P79522 188 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TOMM34Q15785 309 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RFX4Q33E94 735 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTLL9Q3SXZ7 439 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CDNFQ49AH0 187 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF658BQ4V348 819 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GCSAMLQ5JQS6 135 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SYT6Q5T7P8 510 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OGFRL1Q5TC84 451 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTC33Q6PID6 262 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACP7Q6ZNF0 438 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 THOC6Q86W42 341 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM61Q8N0U2 210 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DL5AQ8N109 375 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 Q8N402 240 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATPAF2Q8N5M1 289 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM71E2Q8N5Q1 922 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM156Q8N614 296 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 Q8N9W7 124 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 UBAC2Q8NBM4 344 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR8K1Q8NGG5 319 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10G9Q8NGN4 311 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2G3Q8NGZ4 309 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 KIR2DL5BQ8NHK3 375 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 NT5CQ8TCD5 201 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GEMIN6Q8WXD5 167 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 IL22RA2Q969J5 263 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 YIPF6Q96EC8 236 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GALNT14Q96FL9 552 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 UBE2E2Q96LR5 201 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RILPQ96NA2 401 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 GABARAPL3Q9BY60 117 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 PARD6GQ9BYG4 376 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRPS26Q9BYN8 205 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR11A1Q9GZK7 315 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 NXF2Q9GZY0 626 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRIM45Q9H8W5 580 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 ABCB9Q9NP78 766 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 EXOSC4Q9NPD3 245 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCL28Q9NRJ3 127 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 RGS18Q9NS28 235 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 FGFR1OP2Q9NVK5 253 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 DNAJC27Q9NZQ0 273 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 CLCF1Q9UBD9 225 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRMT112Q9UI30 125 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 C3orf18Q9UK00 162 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 SIGLEC9Q9Y336 463 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 TBL2Q9Y4P3 447 aaKnown RBP1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 MTCH2Q9Y6C9 303 aa1.61□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A0G2JN53 185 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2AT4A6NND4 320 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms