RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PLCXD3Q63HM9 321 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 MOB3CQ70IA8 216 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 HAVCR2Q8TDQ0 301 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 C10orf35Q96D05 121 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 POM121Q96HA1 1249 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 VCX3BQ9H321 246 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 TRIM36Q9NQ86 728 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 LPAR3Q9UBY5 353 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 MIOXQ9UGB7 285 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 CDC42EP3Q9UKI2 254 aa15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 DIMT1Q9UNQ2 313 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-209ENST00000503346 ABCA2Q9BZC7 2435 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 ZNF732B4DXR9 585 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 CDIPTO14735 213 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 FOXH1O75593 365 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 PIPP12273 146 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 ZNF12P17014 697 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 CD80P33681 288 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 GPM6AP51674 278 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 ALKBH1Q13686 389 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 KCNJ8Q15842 424 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 CR1LQ2VPA4 569 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 TEX36Q5VZQ5 186 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 DCDC5Q6ZRR9 648 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 RDH10Q8IZV5 341 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 C19orf18Q8NEA5 215 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 OR10Z1Q8NGY1 313 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 LRRC29Q8WV35 223 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 GGHQ92820 318 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 RPL3LQ92901 407 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 OR51I2Q9H344 312 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 METTL17Q9H7H0 456 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 PLCXD1Q9NUJ7 323 aa15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 EXOSC1Q9Y3B2 195 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-209ENST00000503346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.25■□□□□ 0.032e-7■■■□□ 18.1
PDLIM7-209ENST00000503346 TRAV38-1A0A0B4J264 116 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 OOEPA6NGQ2 149 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 OR4C45A6NMZ5 311 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 A8MXK9 166 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 RPS2P15880 293 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 EGR1P18146 543 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 ZFP36P26651 326 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 ETV1P50549 477 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 GBX2P52951 348 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 CHRFAM7AQ494W8 412 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 FAM120AOSQ5T036 256 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 SFRP4Q6FHJ7 346 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 BOLLQ8N9W6 283 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 SCCPDHQ8NBX0 429 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 DEFB108BQ8NET1 73 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 NEIL1Q96FI4 390 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 TMEM80Q96HE8 168 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 SHARPINQ9H0F6 387 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 PLEKHA1Q9HB21 404 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 GPR173Q9NS66 373 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 CNOT2Q9NZN8 540 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 LRCH1Q9Y2L9 728 aa15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 POLR3KQ9Y2Y1 108 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 CAB39Q9Y376 341 aaPredicted RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 SONP18583 2426 aaKnown RBP15.24■□□□□ 0.03
PDLIM7-209ENST00000503346 PPIAL4CA0A0B4J2A2 164 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 EFCAB10A6NFE3 127 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 ANKRD61A6NGH8 418 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 A6NIN4 97 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 SRRM5B3KS81 715 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 E9PI62 339 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 C3orf80F5H4A9 247 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 H3BSH0 61 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 TNFRSF13BO14836 293 aaPredicted RBP15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 NDUFA2O43678 99 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 ATP6V1G2O95670 118 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 MYL12AP19105 171 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 TGM4P49221 684 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 SEC61A1P61619 476 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 LCN2P80188 198 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 ESCO2Q56NI9 601 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 DMRTC1Q5HYR2 192 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 BEX2Q9BXY8 128 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 PSORS1C1Q9UIG5 152 aa15.23■□□□□ 0.03
PDLIM7-209ENST00000503346 PQLC2LA1A4F0 135 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 KIAA1324LA8MWY0 1029 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 XPNPEP2O43895 674 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 RPSAP08865 295 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 CCDC159P0C7I6 412 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 MUC1P15941 1255 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 HNF1AP20823 631 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 ST3GAL4Q11206 333 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 MED21Q13503 144 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 LYPD2Q6UXB3 125 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 TMPRSS11AQ6ZMR5 421 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 NLRC3Q7RTR2 1065 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 FAM90A1Q86YD7 464 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 OR8B3Q8NGG8 313 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 TECTBQ96PL2 329 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 OR8B2Q96RD0 313 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 CHST5Q9GZS9 411 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 HHLA2Q9UM44 414 aa15.22■□□□□ 0.03
PDLIM7-209ENST00000503346 C2CD3Q4AC94 2353 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms