RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SFXN2Q96NB2 322 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 JMJD8Q96S16 334 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 FBXL3Q9UKT7 428 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 TMEM14AQ9Y6G1 99 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 CEP192Q8TEP8 1941 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 OR2M5A3KFT3 312 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 METTL21EPA6NDL7 271 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 C9orf172C9J069 976 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 USP17L23D6RBM5 183 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 TSPAN2O60636 221 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 OR6A2O95222 327 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 LDOC1O95751 146 aaPredicted RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 CPN1P15169 458 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 FOLR1P15328 257 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 AP2S1P53680 142 aaPredicted RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 RPL27P61353 136 aaKnown RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 CFHR1Q03591 330 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 FMODQ06828 376 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 HLA-DQA1Q5Y7H0 255 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 OR10K2Q6IF99 312 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 C8orf86Q6ZUL3 223 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 SLC36A1Q7Z2H8 476 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 GKN2Q86XP6 184 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 ADGRG3Q86Y34 549 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 SPICQ8N5J4 248 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 OR1J4Q8NGS1 313 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 OR14L1PQ8NHC6 308 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 ZNF519Q8TB69 540 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 EMG1Q92979 244 aaKnown RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 ZNF587Q96SQ5 575 aaPredicted RBP7.86□□□□□ -1.15
FN1-227ENST00000498719 MRI1Q9BV20 369 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 WWTR1Q9GZV5 400 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 DIABLOQ9NR28 239 aa7.86□□□□□ -1.15
FN1-227ENST00000498719 COL5A1P20908 1838 aaPredicted RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 TMED7-TICAM2A0A0A6YYA0 188 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 IGLV1-36A0A0B4J1U3 117 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 TMEM272A0A1B0GTI8 110 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 LOC101059948A0A1B0GTJ6 334 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 ARPC5O15511 151 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 DUX1O43812 170 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 LMX1BO60663 402 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 GP1BBP13224 206 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 PSMB6P28072 239 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 NUDT1P36639 197 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 MNDAP41218 407 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 SLC6A8P48029 635 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 PPIAP62937 165 aaKnown RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 IL13RA1P78552 427 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 FGL1Q08830 312 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 RBMS2Q15434 407 aaKnown RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 ELAVL1Q15717 326 aaKnown RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 SIGLEC15Q6ZMC9 328 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 MUC20Q8N307 709 aaPredicted RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 GTPBP8Q8N3Z3 284 aaPredicted RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 TSTD1Q8NFU3 115 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 RNF128Q8TEB7 428 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 ASB5Q8WWX0 329 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 C8orf44Q96CB5 159 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 DUX5Q96PT3 197 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 UTP23Q9BRU9 249 aaKnown RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 ATG5Q9H1Y0 275 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 TAS2R4Q9NYW5 299 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 TMED7Q9Y3B3 224 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 MMACHCQ9Y4U1 282 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 LRP12Q9Y561 859 aa7.85□□□□□ -1.15
FN1-227ENST00000498719 MRPS18BQ9Y676 258 aaKnown RBP7.85□□□□□ -1.15
FN1-227ENST00000498719 SLC22A23A1A5C7 686 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 ZNF354AO60765 605 aaPredicted RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 ZNF432O94892 652 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 OR2A4O95047 310 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 GIPP09681 153 aaPredicted RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 ZNF35P13682 527 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 PGCP20142 388 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 NFYAP23511 347 aaPredicted RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 GNG10P50151 68 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 EIF2B1Q14232 305 aaKnown RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 SLC25A53Q5H9E4 307 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 TEX30Q5JUR7 227 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 GLYATL3Q5SZD4 288 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 C1orf140Q5VVS0 124 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 B3GNTL1Q67FW5 361 aaPredicted RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 TMEM225Q6GV28 225 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 SLC18B1Q6NT16 456 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 ZNF529Q6P280 563 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 ALKAL2Q6UX46 152 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 OR2A7Q96R45 310 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 AIFM2Q9BRQ8 373 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 VN1R1Q9GZP7 353 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 ZNF224Q9NZL3 707 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 MRTO4Q9UKD2 239 aaKnown RBP7.84□□□□□ -1.15
FN1-227ENST00000498719 ARID1AO14497 2285 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 EML6Q6ZMW3 1958 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 EXPH5Q8NEV8 1989 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 IGKV1D-43A0A0B4J1Z2 117 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 SNRPGP15A8MWD9 76 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 MCRIP1C9JLW8 97 aa7.84□□□□□ -1.15
FN1-227ENST00000498719 SLC17A2O00624 439 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms