RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PSG2P11465 335 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 APOC4P55056 127 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SPIBQ01892 262 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 RAB40BQ12829 278 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 APOFQ13790 326 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 DIAPH2-AS1Q14236 149 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SYPL1Q16563 259 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 RSPO1Q2MKA7 263 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 TPTE2P1Q5T6R2 138 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 NANOGP8Q6NSW7 305 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 TNFAIP8L2Q6P589 184 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SLC16A9Q7RTY1 509 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 DPY19L4Q7Z388 723 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 ABHD12Q8N2K0 398 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 LNX2Q8N448 690 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 CD177Q8N6Q3 437 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 LRRC57Q8N9N7 239 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 Q8N9W7 124 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 OR1M1Q8NGA1 313 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 ZNRF2Q8NHG8 242 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 PSMA8Q8TAA3 256 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 RHEBL1Q8TAI7 183 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SPRYD4Q8WW59 207 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 XAGE5Q8WWM1 108 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SLC38A4Q969I6 547 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 FLYWCH2Q96CP2 140 aaKnown RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 NMD3Q96D46 503 aaKnown RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 HES6Q96HZ4 224 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 TSSK3Q96PN8 268 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SEPHS2Q99611 448 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 CLEC7AQ9BXN2 247 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 NUP62CLQ9H1M0 184 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 TMEM133Q9H2Q1 129 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 HRH4Q9H3N8 390 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 REEP4Q9H6H4 257 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 SP140LQ9H930 580 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 NHEJ1Q9H9Q4 299 aaPredicted RBP3.3□□□□□ -1.88
CSTF1-207ENST00000498689 NMRAL1Q9HBL8 299 aa3.3□□□□□ -1.88
CSTF1-207ENST00000498689 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 A0A0B4J203 849 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 A0A1W2PPH5 198 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 A0A1W2PPQ1 181 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 CDHR4A6H8M9 788 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A10PA6NDY2 464 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 ARRDC5A6NEK1 342 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 OR6C6A6NF89 314 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 FAM183AA6NL82 134 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 NCBP2LA6PVI3 153 aaKnown RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SYCE1LA8MT33 242 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 UBE2CO00762 179 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SGCEO43556 437 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 RRP9O43818 475 aaKnown RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 MITFO75030 526 aaPredicted RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 AK1P00568 194 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 IGLV1-47P01700 117 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 LAMP1P11279 417 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 UQCRBP14927 111 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 GCSHP23434 173 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 COPZ1P61923 177 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 GPAT3Q53EU6 434 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 CCDC92Q53HC0 331 aaPredicted RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 LIN54Q6MZP7 749 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 ZCCHC23Q6ZST2 131 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 C6orf120Q7Z4R8 191 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 NET1Q7Z628 596 aaPredicted RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 THNSL2Q86YJ6 484 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 ZNF676Q8N7Q3 588 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 NAT8LQ8N9F0 302 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 OR5L1Q8NGL2 311 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SFXN5Q8TD22 340 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 ASB10Q8WXI3 467 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 HDAC2Q92769 488 aaKnown RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 APOBEC3DQ96AK3 386 aaPredicted RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SLC35G5Q96KT7 338 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 ZNF488Q96MN9 340 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 GPR22Q99680 433 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 BPIFA3Q9BQP9 254 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 DPY30Q9C005 99 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 IQCGQ9H095 443 aaKnown RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 SLC38A1Q9H2H9 487 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 PNPOQ9NVS9 261 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 NLKQ9UBE8 527 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 PYCARDQ9ULZ3 195 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 CHMP2BQ9UQN3 213 aa3.29□□□□□ -1.88
CSTF1-207ENST00000498689 TNPO3Q9Y5L0 923 aaKnown RBP3.29□□□□□ -1.88
CSTF1-207ENST00000498689 EXOC1LA0A1B0GW35 172 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 A0A1W2PPL8 197 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 ANKRD34BA5PLL1 514 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 C9orf118A6NHY6 69 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 CD300LBA8K4G0 201 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 LEUTXA8MZ59 168 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 FAM220BPB1ANY3 271 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 PSMD9O00233 223 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 BHLHE40O14503 412 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 CBFA2T2O43439 604 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 RNF13O43567 381 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 PTP4A3O75365 173 aa3.28□□□□□ -1.88
CSTF1-207ENST00000498689 S1PR2O95136 353 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms