RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 EGLN1Q9GZT9 426 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SLITRK2Q9H156 845 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 TCF7L1Q9HCS4 588 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 EDARQ9UNE0 448 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 SLC7A11Q9UPY5 501 aa11.52□□□□□ -0.57
CPNE1-227ENST00000498056 POLQO75417 2590 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 hCG_1807616A0A1W2PRN6 198 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF732B4DXR9 585 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 PIN1P1O15428 100 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 MAGEB3O15480 346 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 AIREO43918 545 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 NDUFS7O75251 213 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 GPX5O75715 221 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 LY6HO94772 140 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 PLATP00750 562 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 MAS1P04201 325 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 GRPP07492 148 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 CD55P08174 381 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 ADH4P08319 380 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 UCHL1P09936 223 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 CD200P41217 278 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 LSM3P62310 102 aaKnown RBP11.51□□□□□ -0.57
CPNE1-227ENST00000498056 GNG3P63215 75 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 CEACAM21Q3KPI0 293 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 DDI2Q5TDH0 399 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 WDR86Q86TI4 376 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 CDH24Q86UP0 819 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 SPERTQ8NA61 448 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 RFT1Q96AA3 541 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 SPACA5Q96QH8 159 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 NEK6Q9HC98 313 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 TXNL4BQ9NX01 149 aaKnown RBP11.51□□□□□ -0.57
CPNE1-227ENST00000498056 IL19Q9UHD0 177 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 APCP25054 2843 aa11.51□□□□□ -0.57
CPNE1-227ENST00000498056 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 A0A1B0GWJ7 208 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 TMEM210A6NLX4 147 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 OVOL3O00110 214 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 NOL3O60936 208 aaKnown RBP11.5□□□□□ -0.57
CPNE1-227ENST00000498056 HPXP02790 462 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 TNFRSF1AP19438 455 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 PRKACBP22694 351 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 BDKRB2P30411 391 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 CRYBB2P43320 205 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 PTH2RP49190 550 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 POU3F4P49335 361 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF154Q13106 437 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 HNRNPA0Q13151 305 aaKnown RBP11.5□□□□□ -0.57
CPNE1-227ENST00000498056 MAB21L1Q13394 359 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 CARTPTQ16568 116 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 GPR107Q5VW38 600 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 OR5D18Q8NGL1 313 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 GPER1Q99527 375 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 NKX3-1Q99801 234 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-227ENST00000498056 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
CPNE1-227ENST00000498056 RNF167Q9H6Y7 350 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 TREM2Q9NZC2 230 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 FOXJ3Q9UPW0 622 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 GSTK1Q9Y2Q3 226 aa11.5□□□□□ -0.57
CPNE1-227ENST00000498056 LOC100289279A0A1B0GTE1 492 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 SMIM30A4D0T7 59 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 LRP5LA4QPB2 252 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 CDC14BO60729 498 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 GALP22466 123 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 HAAOP46952 286 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 RBP2P50120 134 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 FUT6P51993 359 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 ATP5J2P56134 94 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 MTCP1P56278 107 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 UNQ9370/PRO34162Q6UXP9 181 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 KRT74Q7RTS7 529 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 CLVS1Q8IUQ0 354 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 JAGN1Q8N5M9 183 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 NKAIN3Q8N8D7 197 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 OR5A2Q8NGI9 324 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 ZNF420Q8TAQ5 688 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 NEU4Q8WWR8 484 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 PHYHIPQ92561 330 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 KCTD7Q96MP8 289 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 CENPOQ9BU64 300 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 NAA50Q9GZZ1 169 aaKnown RBP11.49□□□□□ -0.57
CPNE1-227ENST00000498056 FN3KRPQ9HA64 309 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 TMEM138Q9NPI0 162 aa11.49□□□□□ -0.57
CPNE1-227ENST00000498056 C1orf123Q9NWV4 160 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms