RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CENPAP49450 140 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 CD83Q01151 205 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 ATPAF1Q5TC12 328 aaPredicted RBP13.31□□□□□ -0.28
VIM-208ENST00000497849 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 OR5T2Q8NGG2 359 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 OR5K1Q8NHB7 308 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 C12orf43Q96C57 262 aaKnown RBP13.31□□□□□ -0.28
VIM-208ENST00000497849 PITX2Q99697 317 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 NIPSNAP1Q9BPW8 284 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 CDCA4Q9BXL8 241 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 VCX3BQ9H321 246 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 NRIP3Q9NQ35 241 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 TMEM5Q9Y2B1 443 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 U3KQK5 164 aa13.31□□□□□ -0.28
VIM-208ENST00000497849 DNAH7Q8WXX0 4024 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 IGLV1-36A0A0B4J1U3 117 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 E9PQ18 207 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 BHLHE40O14503 412 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 SOCS2O14508 198 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 TFF1P04155 84 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 IFNGR2P38484 337 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 VHLP40337 213 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 CDKN2AP42771 156 aaKnown RBP13.3□□□□□ -0.28
VIM-208ENST00000497849 FXYD6P3P58550 94 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 CSNK2BP67870 215 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 DGUOKQ16854 277 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 STUMQ69YW2 141 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 Q6ZS46 218 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 NRG4Q8WWG1 115 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 KRTAP17-1Q9BYP8 105 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 C14orf119Q9NWQ9 140 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 SIGLEC7Q9Y286 467 aa13.3□□□□□ -0.28
VIM-208ENST00000497849 M0R135 149 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 ANGPTL7O43827 346 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 DUS4LO95620 317 aaKnown RBP13.29□□□□□ -0.28
VIM-208ENST00000497849 PF4V1P10720 104 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 PEX2P28328 305 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 TPTEP56180 551 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 TSPAN31Q12999 210 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 GLYATL3Q5SZD4 288 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 OGFRL1Q5TC84 451 aaPredicted RBP13.29□□□□□ -0.28
VIM-208ENST00000497849 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 LNX2Q8N448 690 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 SLC26A10Q8NG04 563 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 OR1M1Q8NGA1 313 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 OR56B2PQ8NGI1 322 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 OR9Q1Q8NGQ5 310 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 EME1Q96AY2 570 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 ZNF799Q96GE5 643 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 KRCC1Q9NPI7 259 aaPredicted RBP13.29□□□□□ -0.28
VIM-208ENST00000497849 INPP5EQ9NRR6 644 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 B9D1Q9UPM9 204 aa13.29□□□□□ -0.28
VIM-208ENST00000497849 HUWE1Q7Z6Z7 4374 aaKnown RBP13.29□□□□□ -0.28
VIM-208ENST00000497849 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.28□□□□□ -0.28
VIM-208ENST00000497849 A0A1W2PQ09 198 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 G3V2T6 193 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 MITFO75030 526 aaPredicted RBP13.28□□□□□ -0.28
VIM-208ENST00000497849 PEX14O75381 377 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 PF4P02776 101 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 GRK5P34947 590 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 DAPP51397 102 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 MZT1Q08AG7 82 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 BLMHQ13867 455 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 CNN3Q15417 329 aaKnown RBP13.28□□□□□ -0.28
VIM-208ENST00000497849 LRRC36Q1X8D7 754 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 RFX4Q33E94 735 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 TMEM95Q3KNT9 176 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 ZNF788Q6ZQV5 615 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 OR6V1Q8N148 313 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 LINC00471Q8N535 108 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 MAP6Q96JE9 813 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 GAFA1Q96PS6 74 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 GPX7Q96SL4 187 aaPredicted RBP13.28□□□□□ -0.28
VIM-208ENST00000497849 C9orf16Q9BUW7 83 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 SNTG1Q9NSN8 517 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 SLC25A10Q9UBX3 287 aaPredicted RBP13.28□□□□□ -0.28
VIM-208ENST00000497849 CYB5R1Q9UHQ9 305 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 OAZ3Q9UMX2 235 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 PCDHGB5Q9Y5G0 923 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 IER3IP1Q9Y5U9 82 aa13.28□□□□□ -0.28
VIM-208ENST00000497849 NDUFB2O95178 105 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 SOX14O95416 240 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.29
VIM-208ENST00000497849 CRABP1P29762 137 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 RAB13P51153 203 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 DPY19L4Q7Z388 723 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 DYNAPQ8N1N2 210 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 OR5AU1Q8NGC0 362 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 OR5D13Q8NGL4 314 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 OR8D4Q8NGM9 314 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 NRBF2Q96F24 287 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 PRSS22Q9GZN4 317 aa13.27□□□□□ -0.29
VIM-208ENST00000497849 DNTTIP1Q9H147 329 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms