RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ERI3O43414 337 aaKnown RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CCDC22O60826 627 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CTNSO60931 367 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 PTTG1O95997 202 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 P01737 135 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 GABRR2P28476 465 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 RGS6P49758 472 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 BCAP31P51572 246 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CLDN6P56747 220 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 PAFAH1B2P68402 229 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 SLC35A1P78382 337 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 ATP5G2Q06055 141 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 C2orf54Q08AI8 447 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 LAMTOR4Q0VGL1 99 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 IHHQ14623 411 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TSC22D1Q15714 1073 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 IGFBP7Q16270 282 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 C5orf64Q2M2E5 130 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 RPEL1Q2QD12 228 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 DEFB134Q4QY38 66 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 APOBEC3HQ6NTF7 200 aaKnown RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 ULK3Q6PHR2 472 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TBPL2Q6SJ96 375 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 USP50Q70EL3 339 aaPredicted RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TRMT10CQ7L0Y3 403 aaKnown RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TMCO2Q7Z6W1 182 aaPredicted RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CMTM8Q8IZV2 173 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 SLC26A10Q8NG04 563 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 GPX8Q8TED1 209 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 CERS2Q96G23 380 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 PDCD1LG2Q9BQ51 273 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 ZNF442Q9H7R0 627 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TREX1Q9NSU2 369 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 ZNF586Q9NXT0 402 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TAS2R1Q9NYW7 299 aa1.64□□□□□ -2.15
PSPC1-205ENST00000497722 NPHP4O75161 1426 aaPredicted RBP1.64□□□□□ -2.15
PSPC1-205ENST00000497722 TRAV8-6A0A0B4J262 113 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 C16orf90A8MZG2 172 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 H3BN98 237 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 DFFAO00273 331 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 GCGP01275 180 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 STAG3L3P0CL85 134 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 HLA-GP17693 338 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 NELFEP18615 380 aaKnown RBP1.63□□□□□ -2.15
PSPC1-205ENST00000497722 CCT6AP40227 531 aaKnown RBP1.63□□□□□ -2.15
PSPC1-205ENST00000497722 ATP6V0D1P61421 351 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 RAB11AP62491 216 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 GRB2P62993 217 aaKnown RBP1.63□□□□□ -2.15
PSPC1-205ENST00000497722 IRF8Q02556 426 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 RAB11BQ15907 218 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 PYDC2Q56P42 97 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 HSP90AA4PQ58FG1 418 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 STEAP4Q687X5 459 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 ITPRIPQ8IWB1 547 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 LRRC8AQ8IWT6 810 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 SLC7A5P1Q8MH63 180 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 CYB561A3Q8NBI2 242 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 PROKR2Q8NFJ6 384 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 OR5T3Q8NGG3 340 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 OR10Z1Q8NGY1 313 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 OR52N1Q8NH53 320 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 ZNF420Q8TAQ5 688 aaPredicted RBP1.63□□□□□ -2.15
PSPC1-205ENST00000497722 AGR3Q8TD06 166 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 S100PBPQ96BU1 408 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 OTUB2Q96DC9 234 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 C18orf15Q96N68 181 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 TM2D3Q9BRN9 247 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 AGMATQ9BSE5 352 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 BLZF1Q9H2G9 400 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 ARMC7Q9H6L4 198 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 LINC00574Q9H8X3 128 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 FANCEQ9HB96 536 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 CD209Q9NNX6 404 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 LZTFL1Q9NQ48 299 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 ASF1BQ9NVP2 202 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 STX18Q9P2W9 335 aaKnown RBP1.63□□□□□ -2.15
PSPC1-205ENST00000497722 TICRRQ7Z2Z1 1910 aa1.63□□□□□ -2.15
PSPC1-205ENST00000497722 GOLGA6L4A6NEF3 574 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 NCF1BA6NI72 391 aaPredicted RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 VGLL3A8MV65 326 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 NCF1CA8MVU1 366 aaPredicted RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 CXorf1O96002 111 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 CXCR1P25024 350 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 IL3RAP26951 378 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 ACOT2P49753 483 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 CLDN18P56856 261 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 MEF2BQ02080 365 aaPredicted RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 ZFAND6Q6FIF0 208 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 FAM122BQ7Z309 247 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 RNF10Q8N5U6 811 aaKnown RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 OR6K6Q8NGW6 343 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 CMTM2Q8TAZ6 248 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 GLYATL2Q8WU03 294 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 MRPL20Q9BYC9 149 aaKnown RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 STMN4Q9H169 189 aaPredicted RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 ARV1Q9H2C2 271 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 DUSP21Q9H596 190 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 C8orf33Q9H7E9 229 aaPredicted RBP1.62□□□□□ -2.15
PSPC1-205ENST00000497722 RAB23Q9ULC3 237 aa1.62□□□□□ -2.15
PSPC1-205ENST00000497722 ZNF257Q9Y2Q1 563 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms