RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SHANK1Q9Y566 2161 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 EML5Q05BV3 1969 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 A0A0U1RQK1 487 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 LINC01553A4QN01 128 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 TGOLN2O43493 480 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 KAT7O95251 611 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ERVS71-1P61550 626 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 GLO1Q04760 184 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 HNRNPA1L2Q32P51 320 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF574Q6ZN55 896 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 MED25Q71SY5 747 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC22A24Q8N4F4 322 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 OR13G1Q8NGZ3 307 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 THRSPQ92748 146 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 HDHD3Q9BSH5 251 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 NMNAT2Q9BZQ4 307 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 GOLT1BQ9Y3E0 138 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 RBFOX3A6NFN3 312 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF684Q5T5D7 378 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF66Q6ZN08 573 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC43A2Q8N370 569 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC35G3Q8N808 338 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 FAM3CQ92520 227 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF764Q96H86 408 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 MED29Q9NX70 200 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 GPR132Q9UNW8 380 aa9.43□□□□□ -0.9
TRAPPC12-223ENST00000497597 TICRRQ7Z2Z1 1910 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 EDDM13A0A1B0GTR0 161 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 HIDE1A8MVS5 230 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 FOLR1P15328 257 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 FGF8P55075 233 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC26A5P58743 744 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 MGAT2Q10469 447 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC10A1Q14973 349 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 PDCD1Q15116 288 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 PPA1Q15181 289 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 PRICKLE4Q2TBC4 344 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 WBP2NLQ6ICG8 309 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SFTPA2Q8IWL1 248 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 C20orf196Q8IYI0 205 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 OR2AJ1Q8NGZ0 328 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 MUCL1Q96DR8 90 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 GNRHR2Q96P88 292 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 OR5B2Q96R09 309 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 STACQ99469 402 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 URM1Q9BTM9 101 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 MENTQ9BUN1 341 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 MRPL37Q9BZE1 423 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 HRASLS2Q9NWW9 162 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 A0A1W2PQU0 124 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 NPIPA5E9PKD4 350 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 GPR137BO60478 399 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 CD1AP06126 327 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 MMP16P51512 607 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 RAB38P57729 211 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 TNFRSF9Q07011 255 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 PNLIPRP3Q17RR3 467 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 TEX30Q5JUR7 227 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC22A25Q6T423 547 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZNF440Q8IYI8 595 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 TMEM156Q8N614 296 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 POC1AQ8NBT0 407 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 OR5D14Q8NGL3 314 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 THAP3Q8WTV1 239 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 TVP23CQ96ET8 276 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 GPHA2Q96T91 129 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 HIST1H2BLQ99880 126 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 FGF22Q9HCT0 170 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 NPIPA1Q9UND3 350 aa9.42□□□□□ -0.9
TRAPPC12-223ENST00000497597 IGKV1D-42A0A075B6H8 117 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 CCDC187A0A096LP49 1063 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 H0Y8X5 98 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 H0YIG0 161 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 H3BML4 177 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 TCF21O43680 179 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 CTSBP07858 339 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 EPHA1P21709 976 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 PTGER4P35408 488 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 GNG10P50151 68 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 RND3P61587 244 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 ELOBQ15370 118 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 ARMC6Q6NXE6 501 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 C17orf99Q6UX52 265 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 SLC26A10Q8NG04 563 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 C16orf52Q8NHV5 167 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 RSC1A1Q92681 617 aa9.41□□□□□ -0.9
TRAPPC12-223ENST00000497597 ZFYVE21Q9BQ24 234 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms