RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SLC35F2Q8IXU6 374 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 ZNF555Q8NEP9 628 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 CSNK2A3Q8NEV1 391 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 RAB39BQ96DA2 213 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 MBOAT4Q96T53 435 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 AMELYQ99218 206 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 APOL4Q9BPW4 351 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 VCXQ9H320 206 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 BEX1Q9HBH7 125 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 MSL2Q9HCI7 577 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 FAM118AQ9NWS6 357 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 LRP12Q9Y561 859 aa8.18□□□□□ -1.1
SRSF4-205ENST00000497015 COL7A1Q02388 2944 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 hCG_38984A0A1B0GV85 526 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 CLPSL1A2RUU4 121 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 CD300LBA8K4G0 201 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 CLDN25C9JDP6 229 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 TIMM23O14925 209 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 HOXA3O43365 443 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 SPRY3O43610 288 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 SULT1C4O75897 302 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 PTBP3O95758 552 aaKnown RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 CD200P41217 278 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 MTNR1AP48039 350 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 RAG2P55895 527 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 CXCR4P61073 352 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 SEC61A1P61619 476 aaKnown RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 IL18R1Q13478 541 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 OR8B8Q15620 311 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 TIGD6Q17RP2 521 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 ZIK1Q3SY52 487 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 VAX1Q5SQQ9 334 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 GLYATL3Q5SZD4 288 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 OGFRL1Q5TC84 451 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 ZNF322Q6U7Q0 402 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 LRRN1Q6UXK5 716 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 C9orf139Q6ZV77 190 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 SETD9Q8NE22 299 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 OR2Z1Q8NG97 314 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 OR51G2Q8NGK0 314 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 RHOXF1Q8NHV9 184 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 SPRYD4Q8WW59 207 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 RAB1CQ92928 201 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 MRPL48Q96GC5 212 aaKnown RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 REEP6Q96HR9 211 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 PGAM5Q96HS1 289 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 PRDM13Q9H4Q3 707 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 NUFIP1Q9UHK0 495 aaKnown RBP8.17□□□□□ -1.1
SRSF4-205ENST00000497015 COPS3Q9UNS2 423 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 INSIG2Q9Y5U4 225 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 AUP1Q9Y679 476 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 HSPE1-MOB4S4R3N1 261 aa8.17□□□□□ -1.1
SRSF4-205ENST00000497015 A0A1B0GUS0 222 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 TMEM269A0A1B0GVZ9 245 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 GGT3PA6NGU5 568 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 DHRS7CA6NNS2 312 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 H0YAE9 185 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 H0YJX3 145 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 M0R129 80 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 DLGAP1O14490 977 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 CLPXO76031 633 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PLATP00750 562 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 IGLV3-1P01715 115 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 MRPL3P09001 348 aaKnown RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 ZNF12P17014 697 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PEX2P28328 305 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 CD80P33681 288 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 ATP6V1E1P36543 226 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 ELF3P78545 371 aaPredicted RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 FAM3AP98173 230 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PAX8Q06710 450 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PDCD1Q15116 288 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 TSTQ16762 297 aaKnown RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 ARMCX4Q5H9R4 360 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 MZT2AQ6P582 158 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PLEKHG7Q6ZR37 379 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 BCDIN3DQ7Z5W3 292 aaKnown RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 ENTHD1Q8IYW4 607 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 C1orf87Q8N0U7 546 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 CCDC54Q8NEL0 328 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 OR2AE1Q8NHA4 323 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 LINC01006Q8NI28 216 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 Q8TCH9 128 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 HAVCR2Q8TDQ0 301 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 UBE2FQ969M7 185 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 SGK3Q96BR1 496 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 OR2V2Q96R30 315 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 MS4A7Q9GZW8 240 aaPredicted RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 INPP5EQ9NRR6 644 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 TNFRSF19Q9NS68 423 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 MRPS18AQ9NVS2 196 aaKnown RBP8.16□□□□□ -1.1
SRSF4-205ENST00000497015 FAM206AQ9NX38 181 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 DCAF16Q9NXF7 216 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 DNAJC27Q9NZQ0 273 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 PPP1R3CQ9UQK1 317 aa8.16□□□□□ -1.1
SRSF4-205ENST00000497015 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms