RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 MAD2L1BPQ15013 274 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM244Q5VVB8 128 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GJB7Q6PEY0 223 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF474Q6S9Z5 364 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ALKAL2Q6UX46 152 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF841Q6ZN19 808 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 WDR53Q7Z5U6 358 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SERPINA11Q86U17 422 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TBC1D26Q86UD7 250 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TCTEX1D1Q8N7M0 179 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF439Q8NDP4 499 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 NOXO1Q8NFA2 376 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 BEST4Q8NFU0 473 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR11H4Q8NGC9 324 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5A2Q8NGI9 324 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4A4PQ8NGN8 299 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MBD3L2Q8NHZ7 208 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SAP25Q8TEE9 199 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OVCA2Q8WZ82 227 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IL22RA2Q969J5 263 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SMIM19Q96E16 107 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IL17FQ96PD4 163 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MS4A10Q96PG2 267 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 PBDC1Q9BVG4 233 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SEC11CQ9BY50 192 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MED28Q9H204 178 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ENY2Q9NPA8 101 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 B3GAT2Q9NPZ5 323 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 LYRM2Q9NU23 88 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C11orf21Q9P2W6 132 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 B4GALT7Q9UBV7 327 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IKZF2Q9UKS7 526 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ETV7Q9Y603 341 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TRPM3Q9HCF6 1732 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TNS3Q68CZ2 1445 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A087X0K7 114 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LOC102724200A0A096LPH7 203 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MAP1LC3B2A6NCE7 125 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RNASET2O00584 256 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 HMGB3O15347 200 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ENSAO43768 121 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ALOX12BO75342 701 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 NDUFB8O95169 186 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TTLL1O95922 423 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 IGHG3P01860 377 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 IRF1P10914 325 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 UNGP13051 313 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 AOC1P19801 751 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 AMTP48728 403 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN20P56880 219 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 UBE2MP61081 183 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 PAFAH1B2P68402 229 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RUNX1Q01196 453 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF415Q09FC8 603 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SYPL1Q16563 259 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF284Q2VY69 593 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ATP6AP1LQ52LC2 224 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LY6G6FQ5SQ64 297 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM78Q5T7P6 136 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LYSMD4Q5XG99 296 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RPL22L1Q6P5R6 122 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 BLIDQ8IZY5 108 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ARL14EPQ8N8R7 260 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 EEF1AKMT1Q8WVE0 214 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 BAALCQ8WXS3 180 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DCUN1D4Q92564 292 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GGHQ92820 318 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MYEOVQ96EZ4 313 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DNAJC30Q96LL9 226 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRC3BQ96PB8 259 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TSSK2Q96PF2 358 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF300Q96RE9 604 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ATOH8Q96SQ7 321 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FEVQ99581 238 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR22Q99680 433 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GINS3Q9BRX5 216 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 EFCAB11Q9BUY7 163 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 OR11A1Q9GZK7 315 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MAP1LC3BQ9GZQ8 125 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM39BQ9GZU3 492 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FNDC4Q9H6D8 234 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RDH14Q9HBH5 336 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TAF9BQ9HBM6 251 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GALNT9Q9HCQ5 603 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC17A5Q9NRA2 495 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MRPL27Q9P0M9 148 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DOK5Q9P104 306 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GALPQ9UBC7 116 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DHDHQ9UQ10 334 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM96BQ9Y3D0 163 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRIQ1Q96JM4 1722 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 PZPP20742 1482 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 PALLDQ8WX93 1383 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ABCC6O95255 1503 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0J9YY10 115 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR2DS1A0A191URI9 304 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1B0GX78 115 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PPV9 198 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PRD5 423 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FRG2CA6NGY1 282 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms