RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ORAOV1Q8WV07 137 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 FAM71F1Q96KD3 344 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 METTL26Q96S19 204 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 GPR21Q99679 349 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 IL21Q9HBE4 155 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 TMEM74BQ9NUR3 256 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SLC17A4Q9Y2C5 497 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 ARID1BQ8NFD5 2236 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 FBXO24O75426 580 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 HNRNPA1P09651 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
USF3-204ENST00000496826 SGSHP51688 502 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OR11H7Q8NGC8 314 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 OR4X1Q8NH49 305 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 FYTTD1Q96QD9 318 aaKnown RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 OR8B2Q96RD0 313 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 METTL1Q9UBP6 276 aaKnown RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 ZFYVE16Q7Z3T8 1539 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 CACNA1DQ01668 2161 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 YDJCA8MPS7 323 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 NTN1O95631 604 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 NAAAQ02083 359 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SCARF1Q14162 830 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 FAM110CQ1W6H9 321 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 HSF5Q4G112 596 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 NHSL2Q5HYW2 709 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 GLDNQ6ZMI3 551 aaPredicted RBP5.3□□□□□ -1.56
USF3-204ENST00000496826 ZNF841Q6ZN19 808 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 C20orf196Q8IYI0 205 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 NPEPL1Q8NDH3 523 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 F2RL3Q96RI0 385 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 SFXN1Q9H9B4 322 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 JCADQ9P266 1359 aa5.3□□□□□ -1.56
USF3-204ENST00000496826 PAGE4O60829 102 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 ONECUT2O95948 504 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 HOXB5P09067 269 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SOX3P41225 446 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 ZNF66Q6ZN08 573 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 OR4C13Q8NGP0 309 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 RNF133Q8WVZ7 376 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 GPR82Q96P67 336 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 OR6C76A6NM76 312 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 FCN1O00602 326 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 KLF11O14901 512 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SMAD6O43541 496 aaKnown RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 ADRB1P08588 477 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 HRH1P35367 487 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 AQP4P55087 323 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PCBP4P57723 403 aaKnown RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 TAS1R1Q7RTX1 841 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PRSS48Q7RTY5 328 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 CCDC190Q86UF4 302 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SPPL3Q8TCT6 385 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 CHD4Q14839 1912 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 KCNE1BA0A087WTH5 132 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SMIM35A0A1B0GVV1 85 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 CREG1O75629 220 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 MGPP08493 103 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PRSS56P0CW18 603 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 MPC1LP0DKB6 136 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 BMP2P12643 396 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 EBPQ15125 230 aaKnown RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 NKX1-1Q15270 411 aaPredicted RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 TMEM78Q5T7P6 136 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 RPUSD3Q6P087 351 aaKnown RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 MAFAQ8NHW3 353 aaPredicted RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 ZBTB45Q96K62 511 aaPredicted RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 NIPSNAP1Q9BPW8 284 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 CLASP1Q7Z460 1538 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 ROBO3Q96MS0 1386 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 A0A1W2PP18 115 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 hADV38S2A0JD32 116 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 A6NL46 340 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 APOMO95445 188 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SRFP11831 508 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 VPREB1P12018 145 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 GM2AP17900 193 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PLNP26678 52 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SUMO3P55854 103 aaPredicted RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 IFITM2Q01629 132 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 ATXN8Q156A1 80 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 FAM106AQ4KMX7 169 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 Q7L0L9 218 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 TBC1D10CQ8IV04 446 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 MCHR2Q969V1 340 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 RANBP9Q96S59 729 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 ZFYVE21Q9BQ24 234 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 SSBP4Q9BWG4 385 aaPredicted RBP5.29□□□□□ -1.56
USF3-204ENST00000496826 CCL27Q9Y4X3 112 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 TEX48A0A1B0GUV7 120 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 PF4P02776 101 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 KLKB1P03952 638 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 VHLLQ6RSH7 139 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 CYB561D1Q8N8Q1 229 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 POC1AQ8NBT0 407 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 WFDC11Q8NEX6 87 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 MAP6Q96JE9 813 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 OR2A5Q96R48 311 aa5.29□□□□□ -1.56
USF3-204ENST00000496826 RTTNQ86VV8 2226 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms