RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-209	ENST00000496445	OR5K1	Q8NHB7	308 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZDHHC16	Q969W1	377 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	TMIGD2	Q96BF3	282 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	RNF170	Q96K19	258 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	GAFA1	Q96PS6	74 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	OR8B4	Q96RC9	309 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	MRO	Q9BYG7	248 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	CHIA	Q9BZP6	476 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	PBOV1	Q9GZY1	135 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	CNTD2	Q9H8S5	307 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	TNFRSF19	Q9NS68	423 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	ACOXL	Q9NUZ1	547 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445	KPTN	Q9Y664	436 aa		11.76	□□□□□ -0.53
VTI1A-209	ENST00000496445		A0A0U1RQK1	487 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	TMEM269	A0A1B0GVZ9	245 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	FAM181B	A6NEQ2	426 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ACOD1	A6NK06	481 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	NDUFB3	O43676	98 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	SRSF10	O75494	262 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ESRRG	P62508	458 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	EFNB1	P98172	346 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	RELB	Q01201	579 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	PRB3	Q04118	309 aa	Predicted RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	DGUOK	Q16854	277 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	CDON	Q4KMG0	1287 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	DMRTC1	Q5HYR2	192 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	CEP78	Q5JTW2	689 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	PRR31	Q5SQ13	230 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	AADACL4	Q5VUY2	407 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	SLX4IP	Q5VYV7	408 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	DMRTA1	Q5VZB9	504 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	C12orf73	Q69YU5	71 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	KCTD18	Q6PI47	426 aa	Predicted RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	FIP1L1	Q6UN15	594 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF788	Q6ZQV5	615 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF679	Q8IYX0	411 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ANGPTL6	Q8NI99	470 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	FAM81A	Q8TBF8	368 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	OR51E1	Q8TCB6	317 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	PPP1R14A	Q96A00	147 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	CNN2	Q99439	309 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	DCTN5	Q9BTE1	182 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	GABARAPL1	Q9H0R8	117 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ADGRL4	Q9HBW9	690 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	GPR84	Q9NQS5	396 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	KRT84	Q9NSB2	600 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ONECUT1	Q9UBC0	465 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	DNAJB11	Q9UBS4	358 aa		11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	NUFIP1	Q9UHK0	495 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZAR1L	A6NP61	321 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	FAH	P16930	419 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	MAP2K3	P46734	347 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	DLX1	P56177	255 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	KDM4D	Q6B0I6	523 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	PLEKHG7	Q6ZR37	379 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	MEPCE	Q7L2J0	689 aa	Known RBP	11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	TMEM86B	Q8N661	226 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	KIR3DL3	Q8N743	410 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445		Q8N7P7	452 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	TCEANC	Q8N8B7	351 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	C8orf46	Q8TAG6	207 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	ASB17	Q8WXJ9	295 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	DNTTIP1	Q9H147	329 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	OR51I2	Q9H344	312 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	SIRT7	Q9NRC8	400 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	NLK	Q9UBE8	527 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF222	Q9UK12	451 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	MMP24	Q9Y5R2	645 aa		11.74	□□□□□ -0.53
VTI1A-209	ENST00000496445	IGKV1D-17	A0A075B6S4	117 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445		A0A1B0GVI7	797 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	NKX6-3	A6NJ46	265 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF732	B4DXR9	585 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	GPR37	O15354	613 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	SIGLEC5	O15389	551 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	MAGEB4	O15481	346 aa	Predicted RBP	11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF254	O75437	659 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	IGHV4-59	P01825	116 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	TTR	P02766	147 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	GLRA1	P23415	457 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	RIDA	P52758	137 aa	Known RBP	11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	CXCR4	P61073	352 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	GNG3	P63215	75 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	PRKDC	P78527	4128 aa	Known RBP	11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	CEACAM21	Q3KPI0	293 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	LRRC10	Q5BKY1	277 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	NXNL2	Q5VZ03	156 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	COMMD2	Q86X83	199 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	LDLRAD3	Q86YD5	345 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	SLC35F2	Q8IXU6	374 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	TMEM163	Q8TC26	289 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	PRRG3	Q9BZD7	231 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	SEMA6A	Q9H2E6	1030 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	ZNF696	Q9H7X3	374 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	C1RL	Q9NZP8	487 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	IKZF2	Q9UKS7	526 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	PIGL	Q9Y2B2	252 aa		11.73	□□□□□ -0.53
VTI1A-209	ENST00000496445	POMT1	Q9Y6A1	747 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms