RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 NDUFB2O95178 105 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 IGLV1-44P01699 117 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 MYOD1P15172 320 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ZNF43P17038 809 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 NPR2P20594 1047 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 SLC6A6P31641 620 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ERVFC1-1P60608 527 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 UBE2NP61088 152 aaKnown RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 ADARB1P78563 741 aaKnown RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 RPL36AP83881 106 aaKnown RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 CDK5Q00535 292 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 MYBPC1Q00872 1141 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 RPL18Q07020 188 aaKnown RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 ZP4Q12836 540 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ANKDD1AQ495B1 522 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ABHD12BQ7Z5M8 362 aaPredicted RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 MYPOPQ86VE0 399 aaPredicted RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 NUP37Q8NFH4 326 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 OR4F15Q8NGB8 312 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 OR9K2Q8NGE7 335 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 OR8D4Q8NGM9 314 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 OR4Q3Q8NH05 313 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 SGMS2Q8NHU3 365 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 TEX47Q8TBZ9 253 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 FANK1Q8TC84 345 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ZFAND2BQ8WV99 257 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 DNAJC9Q8WXX5 260 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 Q96M85 177 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 OXGR1Q96P68 337 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ERMAPQ96PL5 475 aaPredicted RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 ALKBH3Q96Q83 286 aaPredicted RBP5.41□□□□□ -1.54
VIM-207ENST00000495528 TPK1Q9H3S4 243 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 ZNF442Q9H7R0 627 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 INIPQ9NRY2 104 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 TVP23BQ9NYZ1 205 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 GMPPBQ9Y5P6 360 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 CDH10Q9Y6N8 788 aa5.41□□□□□ -1.54
VIM-207ENST00000495528 A0A1W2PRG6 482 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR6C65A6NJZ3 312 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ZNF726A6NNF4 738 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 B4DSR2 109 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 SLC2A10O95528 541 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CLIC3O95833 236 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 BCL10O95999 233 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 IGKV3-15P01624 115 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 HMGN1P05114 100 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ERCC1P07992 297 aaPredicted RBP5.4□□□□□ -1.54
VIM-207ENST00000495528 CD14P08571 375 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ADRA2AP08913 450 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TSPAN19P0C672 248 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CBR1P16152 277 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ANXA7P20073 488 aaKnown RBP5.4□□□□□ -1.54
VIM-207ENST00000495528 PAX7P23759 505 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 COL8A2P25067 703 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CAPGP40121 348 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CLDN17P56750 224 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 RPL27P61353 136 aaKnown RBP5.4□□□□□ -1.54
VIM-207ENST00000495528 ACTG1P63261 375 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 PUDPQ08623 228 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 SNAPC1Q16533 368 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 KLHL22Q53GT1 634 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TTC23Q5W5X9 447 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 RPL13AP3Q6NVV1 102 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 SLC27A4Q6P1M0 643 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 NIPAL3Q6P499 406 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TMEM154Q6P9G4 183 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 UGT2A3Q6UWM9 527 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 NHLRC1Q6VVB1 395 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 DPY19L2P2Q6ZN68 376 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ZNF620Q6ZNG0 422 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 SLC35D2Q76EJ3 337 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 NR2C2APQ86WQ0 139 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TMEM219Q86XT9 240 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 C1orf87Q8N0U7 546 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 PARP8Q8N3A8 854 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CLDN22Q8N7P3 220 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 C3orf56Q8N813 242 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TCEANCQ8N8B7 351 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 LRRC75AQ8NAA5 344 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 POC1AQ8NBT0 407 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR52L1Q8NGH7 329 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR1J2Q8NGS2 313 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR4K13Q8NH42 304 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR5R1Q8NH85 324 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 CLDND2Q8NHS1 167 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 PLEKHA8Q96JA3 519 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 RDH12Q96NR8 316 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 IL4I1Q96RQ9 567 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 EMC6Q9BV81 110 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 TEX12Q9BXU0 123 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 LPAR2Q9HBW0 351 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 MED29Q9NX70 200 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 ENOPH1Q9UHY7 261 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 RASD1Q9Y272 281 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 OR2W1Q9Y3N9 320 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 LRRC42Q9Y546 428 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 SESN1Q9Y6P5 492 aa5.4□□□□□ -1.54
VIM-207ENST00000495528 DYSFO75923 2080 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 IGHV2OR16-5A0A0B4J2B6 119 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 LOC102725191A0A1B0GVB3 256 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms