RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 RPS23P62266 143 aaKnown RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 PLCXD2Q0VAA5 305 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 RHEBQ15382 184 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 DTX1Q86Y01 620 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 TCTEX1D2Q8WW35 142 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 DAZLQ92904 295 aaKnown RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 TGM7Q96PF1 710 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 MRPL13Q9BYD1 178 aaKnown RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 LIME1Q9H400 295 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 PNRC2Q9NPJ4 139 aaKnown RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 DECR2Q9NUI1 292 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 C1orf123Q9NWV4 160 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 MEMO1Q9Y316 297 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 C5orf63A6NC05 138 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 ZNF729A6NN14 1252 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 CRTAPO75718 401 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 KNG1P01042 644 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 CSNK2A1P68400 391 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 FZD2Q14332 565 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 GGNBP1Q5YKI7 109 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 CSNK2A3Q8NEV1 391 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 EMC6Q9BV81 110 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SH3BGRL3Q9H299 93 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 ATXN7L1Q9ULK2 861 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 M0R036 132 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SLC2A1P11166 492 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 ZNF20P17024 532 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 AKT2P31751 481 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 TAS2R46P59540 309 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 DMRTC1Q5HYR2 192 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SLC22A8Q8TCC7 542 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 PECRQ9BY49 303 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 FAM212BQ9NTI7 297 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 HS3ST3A1Q9Y663 406 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SLCO1B1Q9Y6L6 691 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 IGHV4-34P06331 123 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 SUCLG1P53597 346 aaKnown RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 DCAF7P61962 342 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 PYY3Q5JQD4 70 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 KLHL24Q6TFL4 600 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 H1FNTQ75WM6 255 aaPredicted RBP13.5□□□□□ -0.25
SDF4-207ENST00000494748 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 GPR84Q9NQS5 396 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 GPR27Q9NS67 375 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 MMACHCQ9Y4U1 282 aa13.5□□□□□ -0.25
SDF4-207ENST00000494748 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 MBPP02686 304 aaPredicted RBP13.49□□□□□ -0.25
SDF4-207ENST00000494748 HOXA5P20719 270 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 OR1D4P47884 311 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 ARFRP1Q13795 201 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 CAPZBP47756 277 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 OR3A2P47893 321 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 AKR7LQ8NHP1 331 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 MFSD8Q8NHS3 518 aa13.49□□□□□ -0.25
SDF4-207ENST00000494748 MCTS1Q9ULC4 181 aaKnown RBP13.49□□□□□ -0.25
SDF4-207ENST00000494748 LSM5Q9Y4Y9 91 aaKnown RBP13.49□□□□□ -0.25
SDF4-207ENST00000494748 DHRS7CA6NNS2 312 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 B4DGG1 531 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 MFAP5Q13361 173 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
SDF4-207ENST00000494748 OR1J1Q8NGS3 322 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 C19orf12Q9NSK7 152 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 SEC16AO15027 2179 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 SPTY2D1-AS1A0A0U1RR47 76 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 ALDH3B1P43353 468 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 GFERP55789 205 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 ZNF121P58317 390 aaPredicted RBP13.48□□□□□ -0.25
SDF4-207ENST00000494748 DBX2Q6ZNG2 339 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 FNDC9Q8TBE3 224 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 C8orf33Q9H7E9 229 aaPredicted RBP13.48□□□□□ -0.25
SDF4-207ENST00000494748 MOB1AQ9H8S9 216 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 CHST11Q9NPF2 352 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 YIF1AO95070 293 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 SEMA4FO95754 770 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 RD3LP0DJH9 198 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 APOBEC1P41238 236 aaKnown RBP13.48□□□□□ -0.25
SDF4-207ENST00000494748 BIDP55957 195 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 SEMA6DQ8NFY4 1073 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
SDF4-207ENST00000494748 A0A1B0GW64 132 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 TMEM150CB9EJG8 249 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 RRP8O43159 456 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 PPP1CCP36873 323 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 P2RY1P47900 373 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 SLC35A1P78382 337 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
SDF4-207ENST00000494748 MUCL1Q96DR8 90 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 SLC35B3Q9H1N7 401 aa13.47□□□□□ -0.25
SDF4-207ENST00000494748 SUSD2Q9UGT4 822 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms