RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ZNF222Q9UK12 451 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 POMPQ9Y244 141 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 MPC1Q9Y5U8 109 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 A0A1W2PRD5 423 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 A0A1W2PRF3 423 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 A0A1W2PRM7 423 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 POM121CA8CG34 1229 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 MAGEB4O15481 346 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 GPR137BO60478 399 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 MITFO75030 526 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 SRSF10O75494 262 aaKnown RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 NDUFA7O95182 113 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 ECDO95905 644 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 IER3P46695 156 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 DAPP51397 102 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 SLC35D3Q5M8T2 416 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 ATPAF1Q5TC12 328 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 PLEKHG7Q6ZR37 379 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 KCTD8Q6ZWB6 473 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 SLC36A1Q7Z2H8 476 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 PAPD5Q8NDF8 572 aaKnown RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 OR10Z1Q8NGY1 313 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 C8orf46Q8TAG6 207 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 SSMEM1Q8WWF3 244 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 UTP4Q969X6 686 aaKnown RBP9.55□□□□□ -0.88
VTI1A-208ENST00000494728 RNF170Q96K19 258 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 NIPAL2Q9H841 368 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 GPR84Q9NQS5 396 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 TVP23BQ9NYZ1 205 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 LAMP5Q9UJQ1 280 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
VTI1A-208ENST00000494728 TMEM210A6NLX4 147 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 NDUFB3O43676 98 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 HMGN1P05114 100 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 FAHP16930 419 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 PAX6P26367 422 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 CRISP1P54107 249 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 SNAPC1Q16533 368 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 C11orf91Q3C1V1 193 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 OLFML2AQ68BL7 652 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 HCP5Q6MZN7 132 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 KRT74Q7RTS7 529 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 KRT77Q7Z794 578 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 OR51E1Q8TCB6 317 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 C17orf50Q8WW18 174 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
VTI1A-208ENST00000494728 FAM71F1Q96KD3 344 aaPredicted RBP9.54□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF488Q96MN9 340 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 OR8B4Q96RC9 309 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 TEAD3Q99594 435 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 CITED1Q99966 193 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 CADM1Q9BY67 442 aaKnown RBP9.54□□□□□ -0.88
VTI1A-208ENST00000494728 PBOV1Q9GZY1 135 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 OR51I2Q9H344 312 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF556Q9HAH1 456 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 PAPOLBQ9NRJ5 636 aaKnown RBP9.54□□□□□ -0.88
VTI1A-208ENST00000494728 ZNRD1Q9P1U0 126 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 KIF17Q9P2E2 1029 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 NLKQ9UBE8 527 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 MAB21L2Q9Y586 359 aa9.54□□□□□ -0.88
VTI1A-208ENST00000494728 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-208ENST00000494728 A0A0U1RQV5 110 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF816-ZNF321PA0A0X1KG74 233 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 TMEM269A0A1B0GVZ9 245 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 CLPSL1A2RUU4 121 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 NKX6-3A6NJ46 265 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 OR2AT4A6NND4 320 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF732B4DXR9 585 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 SIGLEC5O15389 551 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 GYG2O15488 501 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 KNG1P01042 644 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 TTRP02766 147 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 PSG2P11465 335 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ANXA8P13928 327 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 CEBPDP49716 269 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ROM1Q03395 351 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 PTGES3Q15185 160 aaKnown RBP9.53□□□□□ -0.88
VTI1A-208ENST00000494728 DNAL1Q4LDG9 190 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 METAP1DQ6UB28 335 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-208ENST00000494728 BATF2Q8N1L9 274 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 FTMTQ8N4E7 242 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 OR4F5Q8NH21 305 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 AQP3Q92482 292 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 AJUBAQ96IF1 538 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 YIPF3Q9GZM5 350 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 DNTTIP1Q9H147 329 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 BEX1Q9HBH7 125 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 ADGRL4Q9HBW9 690 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 FAM53CQ9NYF3 392 aa9.53□□□□□ -0.88
VTI1A-208ENST00000494728 SLC25A10Q9UBX3 287 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-208ENST00000494728 MEGF11A6BM72 1044 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms