RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CD200P41217 278 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 HILS1P60008 231 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 ZNF154Q13106 437 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 GINS1Q14691 196 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 ZNF181Q2M3W8 571 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 DNAL1Q4LDG9 190 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 PRAMEF6Q5VXH4 476 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 ERI1Q8IV48 349 aaKnown RBP6.74□□□□□ -1.33
RIF1-211ENST00000494333 HS3ST5Q8IZT8 346 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.74□□□□□ -1.33
RIF1-211ENST00000494333 C19orf18Q8NEA5 215 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 DEFB108BQ8NET1 73 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 OR11L1Q8NGX0 322 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 OR6N2Q8NGY6 317 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 ERGIC1Q969X5 290 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 SPSB4Q96A44 273 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 INTS14Q96SY0 518 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 ABHD6Q9BV23 337 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 SLC22A4Q9H015 551 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 MIOXQ9UGB7 285 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 POMPQ9Y244 141 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 INSIG2Q9Y5U4 225 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 AUP1Q9Y679 476 aa6.74□□□□□ -1.33
RIF1-211ENST00000494333 A8MXK9 166 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 PRR23D1E9PI22 279 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 F5H0A9 414 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 XRCC2O43543 280 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 FKBP6O75344 327 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 FSTL3O95633 263 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 HMGN1P05114 100 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ANXA2P07355 339 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 PRR23D2P0DMB1 279 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 ANXA8P13928 327 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ZNF12P17014 697 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 CPT2P23786 658 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 HSD11B1P28845 292 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 CX3CR1P49238 355 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 GNB2P62879 340 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 GRB2P62993 217 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 CBX1P83916 185 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 HOXA4Q00056 320 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 CDK5Q00535 292 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 COL10A1Q03692 680 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ZNF404Q494X3 552 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 KLHL12Q53G59 568 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 TMEM236Q5W0B7 351 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 PLBD1Q6P4A8 553 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 LYPD2Q6UXB3 125 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 USP43Q70EL4 1123 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 SHFQ7M4L6 423 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 KLBQ86Z14 1044 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 CPOQ8IVL8 374 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 BPIFB2Q8N4F0 458 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 BOLLQ8N9W6 283 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 SPERTQ8NA61 448 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 SEMA6DQ8NFY4 1073 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 OR8B3Q8NGG8 313 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 OR56B2PQ8NGI1 322 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 THEM6Q8WUY1 208 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ZFAND2BQ8WV99 257 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 RNF133Q8WVZ7 376 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 SGK3Q96BR1 496 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ZMYND19Q96E35 227 aaPredicted RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 PLEKHA8Q96JA3 519 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 OR8B2Q96RD0 313 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 AMELYQ99218 206 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 SLC6A7Q99884 636 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 ADAT1Q9BUB4 502 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 YY1AP1Q9H869 796 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 SP140LQ9H930 580 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 FN3KRPQ9HA64 309 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 DNAJC27Q9NZQ0 273 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 MRPL15Q9P015 296 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 RNF7Q9UBF6 113 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 DNAJB9Q9UBS3 223 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 OR5V1Q9UGF6 321 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 LRCH1Q9Y2L9 728 aa6.73□□□□□ -1.33
RIF1-211ENST00000494333 NOP16Q9Y3C1 178 aaKnown RBP6.73□□□□□ -1.33
RIF1-211ENST00000494333 DYSFO75923 2080 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 TCRBV3S1A0A5B6 114 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 TRIM77I1YAP6 450 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 SELENOFO60613 162 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 APOC1P02654 83 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 LYNP07948 512 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 H2BFMP0C1H6 154 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 CD80P33681 288 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 DDOSTP39656 456 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 ZNF121P58317 390 aaPredicted RBP6.72□□□□□ -1.33
RIF1-211ENST00000494333 FAM3AP98173 230 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 PAX2Q02962 417 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 PAX8Q06710 450 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 OR8B8Q15620 311 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 TIGD6Q17RP2 521 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 ARMCX4Q5H9R4 360 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 BTNL3Q6UXE8 466 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
RIF1-211ENST00000494333 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
RIF1-211ENST00000494333 DCDC5Q6ZRR9 648 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms