RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 C2CD4CQ8TF44 421 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 POM121L2Q96KW2 1035 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 VN1R1Q9GZP7 353 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 MTFP1Q9UDX5 166 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 TOX3O15405 576 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-207ENST00000494090 DEGS2Q6QHC5 323 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 TMEM123Q8N131 208 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 ZNF251Q9BRH9 671 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 TTC3P53804 2025 aa17.15■□□□□ 0.34
COL27A1-207ENST00000494090 GPR31O00270 319 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 INSL4Q14641 139 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 NIT2Q9NQR4 276 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 IGHV1OR21-1A0A087WYE8 117 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 SH2D7A6NKC9 451 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF727A8MUV8 499 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 OR7C2O60412 319 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 FPR2P25090 351 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 C12orf10Q9HB07 376 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 AQP8O94778 261 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 S100A8P05109 93 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 PAX6P26367 422 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 WIPI1Q5MNZ9 446 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-207ENST00000494090 OR4F5Q8NH21 305 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 OR4F4Q96R69 305 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 ST3GAL2Q16842 350 aa17.14■□□□□ 0.33
COL27A1-207ENST00000494090 BARX1Q9HBU1 254 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-207ENST00000494090 TMEM272A0A1B0GTI8 110 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ALG1L2C9J202 215 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF90Q03938 601 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF141Q15928 474 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 UBAC2Q8NBM4 344 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 DHRS9Q9BPW9 319 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF787Q6DD87 383 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 GUSBP11Q6P575 273 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 UQCC3Q6UW78 93 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 OR4D9Q8NGE8 314 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 IGHV3-64DA0A0J9YX35 117 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 EPHA8P29322 1005 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-207ENST00000494090 RPL7L1Q6DKI1 246 aaKnown RBP17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF705AQ6ZN79 300 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ZFP64Q9NPA5 681 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 RRASP10301 218 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 NUFIP2Q7Z417 695 aaKnown RBP17.13■□□□□ 0.33
COL27A1-207ENST00000494090 OR5M8Q8NGP6 311 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 EXTL1Q92935 676 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 MARVELD1Q9BSK0 173 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 ADAT1Q9BUB4 502 aaKnown RBP17.13■□□□□ 0.33
COL27A1-207ENST00000494090 SLC35D1Q9NTN3 355 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 OR5V1Q9UGF6 321 aa17.13■□□□□ 0.33
COL27A1-207ENST00000494090 SEC14L6B5MCN3 397 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 HPP00738 406 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 ZBTB25P24278 435 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 C1orf53Q5VUE5 145 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 VN1R4Q7Z5H5 301 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 HGDQ93099 445 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 TSPAN32Q96QS1 320 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 CCL27Q9Y4X3 112 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 TRBV5-3A0A0A0MS03 114 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 SPRY1O43609 319 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-207ENST00000494090 CTGFP29279 349 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 AVPR2P30518 371 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 IGFBP7Q16270 282 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 SPICQ8N5J4 248 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 FBXO17Q96EF6 278 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 ANGPTL7O43827 346 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 ANKRD37Q7Z713 158 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 RCL1Q9Y2P8 373 aaKnown RBP17.12■□□□□ 0.33
COL27A1-207ENST00000494090 COX7A2P2O60397 106 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 IAPPP10997 89 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 NXPH1P58417 271 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 ACER2Q5QJU3 275 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 OR8D4Q8NGM9 314 aa17.12■□□□□ 0.33
COL27A1-207ENST00000494090 MEOX1P50221 254 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 MICBQ29980 383 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 ANGPTL6Q8NI99 470 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 ERGIC1Q969X5 290 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CLEC18AA5D8T8 446 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 KCNJ3P48549 501 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CLPPQ16740 277 aaPredicted RBP17.11■□□□□ 0.33
COL27A1-207ENST00000494090 TRILQ7L0X0 811 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CLEC18CQ8NCF0 446 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 ADPRHL1Q8NDY3 354 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 OR13G1Q8NGZ3 307 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 OR2T6Q8NHC8 308 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 TMEM56Q96MV1 263 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 MAGT1Q9H0U3 335 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CTAG2O75638 210 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 AKR1C3P42330 323 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 THSD4Q6ZMP0 1018 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 NPIPB8E9PQR5 432 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 EPPINO95925 133 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 ZP3P21754 424 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 FBXO34Q9NWN3 711 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 TIMM9Q9Y5J7 89 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 SULT1A3P0DMM9 295 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 SULT1A4P0DMN0 295 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 MDH2P40926 338 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms