RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ASH2LQ9UBL3 628 aa10.13□□□□□ -0.79
RFC4-214ENST00000494047 ZNF629Q9UEG4 869 aaPredicted RBP10.13□□□□□ -0.79
RFC4-214ENST00000494047 WASF3Q9UPY6 502 aa10.13□□□□□ -0.79
RFC4-214ENST00000494047 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
RFC4-214ENST00000494047 LOC102723996A0A087X1L8 192 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 NPIPA2E9PIF3 369 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 NPIPA3F8WFD2 350 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 H3BSH0 61 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 TRIM77I1YAP6 450 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 SSX5O60225 188 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 PRKNO60260 465 aaPredicted RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 IFNA2P01563 188 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 CSN2P05814 226 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 HEXAP06865 529 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 CTSDP07339 412 aaPredicted RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 CD79AP11912 226 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 PTGFRP43088 359 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 RAB5CP51148 216 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 SUCLG1P53597 346 aaKnown RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 HIST1H3AP68431 136 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 DEFA5Q01523 94 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 CFHR1Q03591 330 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 SCRN3Q0VDG4 424 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 KISS1Q15726 138 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 SGCAQ16586 387 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 HIST2H3PS2Q5TEC6 136 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 CFAP77Q6ZQR2 320 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 HIST2H3AQ71DI3 136 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 RAB11FIP2Q7L804 512 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 PRSS58Q8IYP2 241 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 OR51T1Q8NGJ9 327 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 M1APQ8TC57 530 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 MARCH1Q8TCQ1 289 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 PPP1R14AQ96A00 147 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 C1orf147Q96MC9 270 aaPredicted RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 KLHDC3Q9BQ90 382 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 PNRC2Q9NPJ4 139 aaKnown RBP10.12□□□□□ -0.79
RFC4-214ENST00000494047 DECR2Q9NUI1 292 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 LPAR3Q9UBY5 353 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 ATPIF1Q9UII2 106 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 OSGIN2Q9Y236 505 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
RFC4-214ENST00000494047 CACNA1CQ13936 2221 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 TMEM8BA6NDV4 472 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 EEF1E1-BLOC1S5C9J1V9 151 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 CST4P01036 141 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 CSTBP04080 98 aaKnown RBP10.11□□□□□ -0.79
RFC4-214ENST00000494047 QDPRP09417 244 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 PGAM2P15259 253 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 PTGDSP41222 190 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 EFNA3P52797 238 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 F2RL1P55085 397 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 MRPS34P82930 218 aaKnown RBP10.11□□□□□ -0.79
RFC4-214ENST00000494047 PJVKQ0ZLH3 352 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 NRN1LQ496H8 165 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 LRRC37A5PQ49AS3 106 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 ZNF385CQ66K41 422 aaPredicted RBP10.11□□□□□ -0.79
RFC4-214ENST00000494047 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 CLEC18BQ6UXF7 455 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 LHFPL2Q6ZUX7 228 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 SULF2Q8IWU5 870 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 ZNF100Q8IYN0 542 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 CSNK2A3Q8NEV1 391 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 FNDC9Q8TBE3 224 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 POC1BQ8TC44 478 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 ADAMTS17Q8TE56 1095 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 KCNE4Q8WWG9 221 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 WDR77Q9BQA1 342 aaPredicted RBP10.11□□□□□ -0.79
RFC4-214ENST00000494047 SYT3Q9BQG1 590 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 SCNM1Q9BWG6 230 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 SUCNR1Q9BXA5 334 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 C5orf66Q9H5L9 145 aa10.11□□□□□ -0.79
RFC4-214ENST00000494047 ZMAT3Q9HA38 289 aaKnown RBP10.11□□□□□ -0.79
RFC4-214ENST00000494047 IGKV1D-43A0A0B4J1Z2 117 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 C13orf42A0A1B0GVH6 325 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FOXI3A8MTJ6 420 aaPredicted RBP10.1□□□□□ -0.79
RFC4-214ENST00000494047 C9J4A7 227 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 PMP2P02689 132 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FGF5P12034 268 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 IL11P20809 199 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 DUSP3P51452 185 aaPredicted RBP10.1□□□□□ -0.79
RFC4-214ENST00000494047 SNU13P55769 128 aaKnown RBP10.1□□□□□ -0.79
RFC4-214ENST00000494047 PCBD1P61457 104 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 H3F3AP84243 136 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 RAB35Q15286 201 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FAM69BQ5VUD6 431 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 OR52W1Q6IF63 320 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 HAGHLQ6PII5 290 aaPredicted RBP10.1□□□□□ -0.79
RFC4-214ENST00000494047 FAM57BQ71RH2 274 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 IQCF2Q8IXL9 164 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FAM185AQ8N0U4 392 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 SLC25A45Q8N413 288 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FAM71E2Q8N5Q1 922 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 GVQW1Q8N7I0 195 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms