RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PRSS45Q7RTY3 260 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 RDH10Q8IZV5 341 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 OR13F1Q8NGS4 319 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 OR2AE1Q8NHA4 323 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 RPS4Y2Q8TD47 263 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 GPR148Q8TDV2 347 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 PGLYRP3Q96LB9 341 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 OPA3Q9H6K4 179 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 EXOSC4Q9NPD3 245 aaKnown RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 GPR84Q9NQS5 396 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF391Q9UJN7 358 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 FBXO9Q9UK97 447 aaPredicted RBP10.36□□□□□ -0.75
UPF3A-210ENST00000493727 HHLA2Q9UM44 414 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 DHDHQ9UQ10 334 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 STARD10Q9Y365 291 aa10.36□□□□□ -0.75
UPF3A-210ENST00000493727 C5orf63A6NC05 138 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 MTRF1O75570 445 aaKnown RBP10.35□□□□□ -0.75
UPF3A-210ENST00000493727 SERPINA3P01011 423 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 CD1AP06126 327 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 OCM2P0CE71 109 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF12P17014 697 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 BLMHQ13867 455 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 TIMM50Q3ZCQ8 353 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 RGS7BPQ6MZT1 257 aaPredicted RBP10.35□□□□□ -0.75
UPF3A-210ENST00000493727 PGAP1Q75T13 922 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 SATL1Q86VE3 508 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 MS4A15Q8N5U1 240 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF525Q8N782 197 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 BVESQ8NE79 360 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 OR13C3Q8NGS6 347 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 OR13C5Q8NGS8 318 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 SLC25A40Q8TBP6 338 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 TMIGD2Q96BF3 282 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 POFUT1Q9H488 388 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 PLEKHA1Q9HB21 404 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 MYOZ1Q9NP98 299 aaPredicted RBP10.35□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF319Q9P2F9 582 aa10.35□□□□□ -0.75
UPF3A-210ENST00000493727 LOC100506127A0A0U1RQW1 187 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 CCDC160A6NGH7 325 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 VSTM5A8MXK1 200 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 NDUFS8O00217 210 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 DHRS3O75911 302 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 HLA-DPB1P04440 258 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ISG15P05161 165 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF20P17024 532 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 USF1P22415 310 aaPredicted RBP10.34□□□□□ -0.75
UPF3A-210ENST00000493727 NR4A1P22736 598 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ANOS1P23352 680 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
UPF3A-210ENST00000493727 GCH1P30793 250 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 TGFBR2P37173 567 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 SOX2P48431 317 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 PDLIM4P50479 330 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ERVS71-1P61550 626 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 SNRPD2P62316 118 aaKnown RBP10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF92Q03936 586 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 ZNF718Q3SXZ3 478 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 GPR107Q5VW38 600 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 CYB5R2Q6BCY4 276 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 CCDC54Q8NEL0 328 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 OR10AC1Q8NH08 325 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 C10orf105Q8TEF2 133 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 THRSPQ92748 146 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 OR2J1Q9GZK6 312 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 STUB1Q9UNE7 303 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 SSR3Q9UNL2 185 aa10.34□□□□□ -0.75
UPF3A-210ENST00000493727 A0A1B0GTI1 187 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 hCG_38984A0A1B0GV85 526 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 H3BSA7 217 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 AIREO43918 545 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 CD2P06729 351 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 SELEP16581 610 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 GADD45AP24522 165 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 GLRXP35754 106 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 GNALP38405 381 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 GZMKP49863 264 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 SELENOVP59797 346 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 GK2Q14410 553 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-210ENST00000493727 HLXQ14774 488 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-210ENST00000493727 Q499Y3 187 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 ACSM3Q53FZ2 586 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 CLVS1Q8IUQ0 354 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-210ENST00000493727 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 SEMA6DQ8NFY4 1073 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 OR51A4Q8NGJ6 313 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 RGP1Q92546 391 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-210ENST00000493727 ITFG2Q969R8 447 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 YIPF6Q96EC8 236 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 LYZL4Q96KX0 146 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 OR14A2Q96R54 314 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 CHCHD6Q9BRQ6 235 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 FUNDC2Q9BWH2 189 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 BEX2Q9BXY8 128 aa10.33□□□□□ -0.76
UPF3A-210ENST00000493727 KRTAP4-8Q9BYQ9 185 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms