RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR8I2Q8N0Y5 310 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM123Q8N131 208 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 BHLHE23Q8NDY6 225 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OR51L1Q8NGJ5 315 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OR51A7Q8NH64 312 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 RASD2Q96D21 266 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 RSPRY1Q96DX4 576 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ACY3Q96HD9 319 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 YPEL4Q96NS1 127 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 RNF126Q9BV68 326 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GPR35Q9HC97 309 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 AURKAIP1Q9NWT8 199 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ABI3Q9P2A4 366 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 RCL1Q9Y2P8 373 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ZFP37Q9Y6Q3 630 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 TMPRSS11DO60235 418 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GDF9O60383 454 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 DUS4LO95620 317 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 PPICP45877 212 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 CX3CR1P49238 355 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 HTD2P86397 168 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 HSPB3Q12988 150 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 LASP1Q14847 261 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ADIRFQ15847 76 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM177Q53S58 311 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 C1orf53Q5VUE5 145 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 DNM1P34Q6PK57 102 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OPN5Q6U736 354 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF761Q86XN6 746 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 H1FOOQ8IZA3 346 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OR6K2Q8NGY2 324 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SUSD6Q92537 303 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 STARD4Q96DR4 205 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 IL17CQ9P0M4 197 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 WIPI2Q9Y4P8 454 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 MRPS18BQ9Y676 258 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SPAG17Q6Q759 2223 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 C1orf226A1L170 272 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 H7BYZ3 331 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 FRS3O43559 492 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 STK17BO94768 372 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SLC25A14O95258 325 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 STAG3L2P0CL84 134 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OLIG3Q7RTU3 272 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SCN4BQ8IWT1 228 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 CHST4Q8NCG5 386 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 RHBDD1Q8TEB9 315 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SLC46A1Q96NT5 459 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 FAM103A1Q9BTL3 118 aaKnown RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 HCAR1Q9BXC0 346 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SLC32A1Q9H598 525 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SRD5A3Q9H8P0 318 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 FBXO34Q9NWN3 711 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 COLQQ9Y215 455 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-205ENST00000493587 TMED7Q9Y3B3 224 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GTF3C1Q12789 2109 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 B4DGG1 531 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ANKRD66B4E2M5 251 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 LEFTY2O00292 366 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 TRAF3IP2O43734 574 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 MPZL1O95297 269 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SEMA4FO95754 770 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 NDUFV2P19404 249 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ARL3P36405 182 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 PIP5KL1Q5T9C9 394 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 GPR32P1Q8NGA4 272 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 TSEN15Q8WW01 171 aaKnown RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 KXD1Q9BQD3 176 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 HSPB9Q9BQS6 159 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 MS4A8Q9BY19 250 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF319Q9P2F9 582 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 OSGIN2Q9Y236 505 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 VSIG4Q9Y279 399 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 A0A087WUU8 490 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 OR2AG2A6NM03 316 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SAP18O00422 153 aaKnown RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 GPR137BO60478 399 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 DDAH2O95865 285 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 TOMM40O96008 361 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 PDGFBP01127 241 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CTSBP07858 339 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CALCBP10092 127 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 DRD1P21728 446 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 OPRD1P41143 372 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SLC6A9P48067 706 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CNN1P51911 297 aaKnown RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 TPPP2P59282 170 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 RAC3P60763 192 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SIRPAP78324 504 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CDKN3Q16667 212 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ELOA3BQ3SY89 546 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms