RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	RP1	P56715	2156 aa		11.22	□□□□□ -0.61
PSMD11-205	ENST00000493026	C5orf51	A6NDU8	294 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	MFNG	O00587	321 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	CA11	O75493	328 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	ZFAND5	O76080	213 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	SFT2D2	O95562	160 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	LIPC	P11150	499 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	FPR2	P25090	351 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	SURF2	Q15527	256 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	STK11	Q15831	433 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	MICB	Q29980	383 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	HYAL4	Q2M3T9	481 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	KCTD9	Q7L273	389 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	BAP18	Q8IXM2	172 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	CCDC54	Q8NEL0	328 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	OR56B2P	Q8NGI1	322 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	POC1B	Q8TC44	478 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	MARCH1	Q8TCQ1	289 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	CASTOR1	Q8WTX7	329 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	DNASE2B	Q8WZ79	361 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	P4HTM	Q9NXG6	502 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	HDGFL3	Q9Y3E1	203 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	WIF1	Q9Y5W5	379 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	DNAH14	Q0VDD8	3507 aa		11.21	□□□□□ -0.61
PSMD11-205	ENST00000493026	LOC100509620	A0A075B734	347 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	TRBV11-1	A0A0K0K1C0	115 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ATP6V1G2-DDX39B	F2Z307	99 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ATG12	O94817	140 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PMP2	P02689	132 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ZNF17	P17021	662 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ZNF121	P58317	390 aa	Predicted RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	TAS2R46	P59540	309 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ECH1	Q13011	328 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PABPC1L2A	Q5JQF8	200 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PLAC9	Q5JTB6	97 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PDSS1	Q5T2R2	415 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	RTL6	Q6ICC9	239 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	TMEM71	Q6P5X7	295 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	DRAM2	Q6UX65	266 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	LHFPL1	Q86WI0	220 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	SLC25A45	Q8N413	288 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	OR8B12	Q8NGG6	310 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	RNF141	Q8WVD5	230 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	WDR77	Q9BQA1	342 aa	Predicted RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	RNF126	Q9BV68	326 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	ZNF416	Q9BWM5	594 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	NKX6-2	Q9C056	277 aa	Predicted RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PNRC2	Q9NPJ4	139 aa	Known RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	GPR84	Q9NQS5	396 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	MRPS17	Q9Y2R5	130 aa	Known RBP	11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026	PCDH15	Q96QU1	1955 aa		11.21	□□□□□ -0.62
PSMD11-205	ENST00000493026		A0A0A6YYD4	124 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	TMEM218	A2RU14	115 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	TLX3	O43711	291 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	MPIG6B	O95866	241 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	H2AFB1	P0C5Y9	115 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	CD79A	P11912	226 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PRF1	P14222	555 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PNLIP	P16233	465 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PTGDS	P41222	190 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	NPY4R	P50391	375 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	LSM6	P62312	80 aa	Known RBP	11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SAMD5	Q5TGI4	173 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	ATRAID	Q6UW56	229 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SHISA6	Q6ZSJ9	500 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026		Q7L0L9	218 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	ARMC10	Q8N2F6	343 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SVBP	Q8N300	66 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	TMEM104	Q8NE00	496 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SLC22A8	Q8TCC7	542 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	NICN1	Q9BSH3	213 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	C5orf66	Q9H5L9	145 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SEC61A2	Q9H9S3	476 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	MYOT	Q9UBF9	498 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	DNAJB11	Q9UBS4	358 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PRSS50	Q9UI38	385 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PURG	Q9UJV8	347 aa	Known RBP	11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	CSAG2	Q9Y5P2	127 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	IGLV3-1	P01715	115 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PET100	P0DJ07	73 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PGAM2	P15259	253 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SLC6A9	P48067	706 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	TMEM50B	P56557	158 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	DEFA5	Q01523	94 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	SGCA	Q16586	387 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PRSS54	Q6PEW0	395 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026		Q6ZSR3	168 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	PNLDC1	Q8NA58	520 aa	Known RBP	11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	OR5H2	Q8NGV7	314 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	DCUN1D4	Q92564	292 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	AQP10	Q96PS8	301 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	METTL7A	Q9H8H3	244 aa		11.2	□□□□□ -0.62
PSMD11-205	ENST00000493026	ASH2L	Q9UBL3	628 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms