RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-216ENST00000492977 ZFP69Q49AA0 526 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 METTL11BQ5VVY1 283 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 CD276Q5ZPR3 534 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 TRAPPC6BQ86SZ2 158 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 GCNT2Q8N0V5 402 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 RBMXL3Q8N7X1 1067 aaKnown RBP12.15□□□□□ -0.46
PTPN7-216ENST00000492977 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 OR6K3Q8NGY3 331 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 BOD1Q96IK1 185 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 METTL9Q9H1A3 318 aa12.15□□□□□ -0.46
PTPN7-216ENST00000492977 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN7-216ENST00000492977 URB1O60287 2271 aaKnown RBP12.15□□□□□ -0.47
PTPN7-216ENST00000492977 A0A1W2PP11 408 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 FAM230AA0A1W2PPH8 454 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
PTPN7-216ENST00000492977 SOCS1O15524 211 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 GFRA3O60609 400 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 PDGFAP04085 211 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 IL5P05113 134 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 TMEM225BP0DP42 221 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 CCL2P13500 99 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 HIST1H1DP16402 221 aaKnown RBP12.14□□□□□ -0.47
PTPN7-216ENST00000492977 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 MEF2DQ14814 521 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 MOB3CQ70IA8 216 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 MRPL21Q7Z2W9 205 aaKnown RBP12.14□□□□□ -0.47
PTPN7-216ENST00000492977 MDP1Q86V88 176 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 CSNK2A3Q8NEV1 391 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 PIGCQ92535 297 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF75AQ96N20 296 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 FLVCR2Q9UPI3 526 aa12.14□□□□□ -0.47
PTPN7-216ENST00000492977 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 J3QW42 95 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF780AO75290 641 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 SPINK2P20155 84 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 TBPP20226 339 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 SERPINA2P20848 420 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CPT2P23786 658 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 TMEM50BP56557 158 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 GNG2P59768 71 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CBX3Q13185 183 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CNEP1R1Q8N9A8 125 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 OR51S1Q8NGJ8 323 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 OR5L1Q8NGL2 311 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 FYTTD1Q96QD9 318 aaKnown RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 GINS4Q9BRT9 223 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ELL3Q9HB65 397 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 IFT46Q9NQC8 304 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PLSCR4Q9NRQ2 329 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 FOXI3A8MTJ6 420 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 MFNGO00587 321 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CST4P01036 141 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CSTBP04080 98 aaKnown RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 MPZP25189 248 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 CBX5P45973 191 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 RSU1Q15404 277 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 FCN2Q15485 313 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ST3GAL2Q16842 350 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PLEKHN1Q494U1 663 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF585AQ6P3V2 769 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 GLDNQ6ZMI3 551 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 C1orf162Q8NEQ5 155 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 SLC30A7Q8NEW0 376 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 GPR137Q96N19 417 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-216ENST00000492977 BEX2Q9BXY8 128 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 IL36GQ9NZH8 169 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 SCP2D1Q9UJQ7 156 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 ANAPC10Q9UM13 185 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 WASF3Q9UPY6 502 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
PTPN7-216ENST00000492977 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-216ENST00000492977 ZNF850A8MQ14 1090 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms