RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 ZFAND1Q8TCF1 268 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 CA5BP1Q8WTZ4 195 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 ABHD1Q96SE0 405 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 CACNG2Q9Y698 323 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 HIVEP3Q5T1R4 2406 aa12.14□□□□□ -0.47
PDZRN3-210ENST00000492909 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 M0R1B8 84 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 AIPO00170 330 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 TMEM127O75204 238 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 ERCC1P07992 297 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 ATF1P18846 271 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 UCP2P55851 309 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 PRSS12P56730 875 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 PPP1CBP62140 327 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 NAAAQ02083 359 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 HLXQ14774 488 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 Q5BKY6 102 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 C22orf34Q6ZV56 151 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 DTX3Q8N9I9 347 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 OR5H6Q8NGV6 325 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 LRRC46Q96FV0 321 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 BTCP35070 178 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 RAD52P43351 418 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 PITPNAQ00169 270 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 HES5Q5TA89 166 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 POFUT1Q9H488 388 aa12.13□□□□□ -0.47
PDZRN3-210ENST00000492909 ZNF816-ZNF321PA0A0X1KG74 233 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 GGT3PA6NGU5 568 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 CRYAAP02489 173 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 CFPP27918 469 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 MMP15P51511 669 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 CLVS2Q5SYC1 327 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 SPATA46Q5T0L3 261 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 FBXW12Q6X9E4 464 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 OR56B2PQ8NGI1 322 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 FOXRED1Q96CU9 486 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 CMTM3Q96MX0 182 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 MRI1Q9BV20 369 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 BCL2L14Q9BZR8 327 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 MCUBQ9NWR8 336 aa12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 UBR5O95071 2799 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-210ENST00000492909 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 SLC17A2O00624 439 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 ALX3O95076 343 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 DHFRP00374 187 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 CD37P11049 281 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 TUBG1P23258 451 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 CALCRP30988 508 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 SRSF1Q07955 248 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 UBE2V2Q15819 145 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 WFDC8Q8IUA0 241 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 OR5AS1Q8N127 324 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 FTMTQ8N4E7 242 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 CSNK2A3Q8NEV1 391 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 OR52N4Q8NGI2 321 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 ZNF671Q8TAW3 534 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 KCNJ16Q9NPI9 418 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 KCNN3Q9UGI6 736 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 NUBP2Q9Y5Y2 271 aa12.11□□□□□ -0.47
PDZRN3-210ENST00000492909 IGKV1-9A0A0C4DH69 117 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CD300LBA8K4G0 201 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CTDSPLO15194 276 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 GMDSO60547 372 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 NRASP01111 189 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 ALDOBP05062 364 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 HCKP08631 526 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 TMEM108Q6UXF1 575 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 OR6M1Q8NGM8 313 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 SLC25A40Q8TBP6 338 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 SORCS2Q96PQ0 1159 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 C7orf50Q9BRJ6 194 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 METTL17Q9H7H0 456 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 LIN7BQ9HAP6 207 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms