RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SFRP4Q6FHJ7 346 aaPredicted RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 RPL22L1Q6P5R6 122 aaKnown RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 C11orf53Q8IXP5 236 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 MUC20Q8N307 709 aaPredicted RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 LINC01356Q8N9X3 169 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 OR13C3Q8NGS6 347 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 OR5AK2Q8NH90 309 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 LRRC29Q8WV35 223 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 RPL3LQ92901 407 aaKnown RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 FGGYQ96C11 551 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 C10orf35Q96D05 121 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 FGF23Q9GZV9 251 aaPredicted RBP11.74□□□□□ -0.53
CCM2-217ENST00000492883 Q9H521 79 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 TMEM165Q9HC07 324 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 FKBP14Q9NWM8 211 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 SLC7A11Q9UPY5 501 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 ERGIC3Q9Y282 383 aa11.74□□□□□ -0.53
CCM2-217ENST00000492883 B4DSR2 109 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 MYL12BO14950 172 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 ZFPL1O95159 310 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 IGHV2-5P01817 119 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 CDK1P06493 297 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
CCM2-217ENST00000492883 ZNF20P17024 532 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 FAM76BQ5HYJ3 339 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 SCCPDHQ8NBX0 429 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 C19orf18Q8NEA5 215 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 OR51I2Q9H344 312 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 METTL17Q9H7H0 456 aaPredicted RBP11.73□□□□□ -0.53
CCM2-217ENST00000492883 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 TRIM36Q9NQ86 728 aa11.73□□□□□ -0.53
CCM2-217ENST00000492883 A8MV72 311 aaPredicted RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 LGALS8O00214 317 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 OGG1O15527 345 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 GATBO75879 557 aaKnown RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 FSTL3O95633 263 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 LHBP01229 141 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 OCM2P0CE71 109 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 OCMP0CE72 109 aaPredicted RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 CD80P33681 288 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 CDK5R1Q15078 307 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 KCNJ8Q15842 424 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 XAF1Q6GPH4 301 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 HAGHLQ6PII5 290 aaPredicted RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 ZNF573Q86YE8 665 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 GCSAMQ8N6F7 178 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 OR51A4Q8NGJ6 313 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 OR10AC1Q8NH08 325 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 ZNF671Q8TAW3 534 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 TSEN15Q8WW01 171 aaKnown RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 PP6455Q8WZ26 134 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 ADAT3Q96EY9 351 aaPredicted RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 CHST5Q9GZS9 411 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
CCM2-217ENST00000492883 MIOXQ9UGB7 285 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 DHDHQ9UQ10 334 aa11.72□□□□□ -0.53
CCM2-217ENST00000492883 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 FAM230AA0A1W2PPH8 454 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 CEACAM18A8MTB9 384 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 CFHR2P36980 270 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 HAAOP46952 286 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 FUT6P51993 359 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 WNT4P56705 351 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 GMFBP60983 142 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 CNN3Q15417 329 aaKnown RBP11.71□□□□□ -0.53
CCM2-217ENST00000492883 UBE2V2Q15819 145 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 ZNF404Q494X3 552 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 OR10Z1Q8NGY1 313 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 OR51F2Q8NH61 342 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 TECTBQ96PL2 329 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 TMEM246Q9BRR3 403 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 CCDC90BQ9GZT6 254 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 KCNS2Q9ULS6 477 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 PCDHGB5Q9Y5G0 923 aa11.71□□□□□ -0.53
CCM2-217ENST00000492883 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.53
CCM2-217ENST00000492883 IGHV3OR15-7A0A075B7D8 119 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 LALBAP00709 142 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 MSMBP08118 114 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 WNT2P09544 360 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 RPS2P15880 293 aaKnown RBP11.7□□□□□ -0.54
CCM2-217ENST00000492883 EGR1P18146 543 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 ATF1P18846 271 aa11.7□□□□□ -0.54
CCM2-217ENST00000492883 CRHBPP24387 322 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms