RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	BRI3	O95415	125 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	IFNG	P01579	166 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SCG5	P05408	212 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	COX4I1	P13073	169 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	HOXB6	P17509	224 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	CFL1	P23528	166 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	COX7A1	P24310	79 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC6A6	P31641	620 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	GGT2	P36268	569 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	CD200	P41217	278 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	YAP1	P46937	504 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	OR3A4P	P47883	348 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	POU3F4	P49335	361 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	NUDT2	P50583	147 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF133	P52736	654 aa	Predicted RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	PSMA6	P60900	246 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	FHL3	Q13643	280 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	LRRC10	Q5BKY1	277 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	WDR38	Q5JTN6	314 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SAMD4B	Q5PRF9	694 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	GLYAT	Q6IB77	296 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC25A47	Q6Q0C1	308 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	HACD2	Q6Y1H2	254 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC36A1	Q7Z2H8	476 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF575	Q86XF7	245 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	EGFL6	Q8IUX8	553 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SGPP2	Q8IWX5	399 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	MKX	Q8IYA7	352 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	OFCC1	Q8IZS5	231 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	GCSAM	Q8N6F7	178 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM86B1	Q8N7N1	296 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	OR4Q3	Q8NH05	313 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	OR8U1	Q8NH10	309 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	BCAS4	Q8TDM0	211 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	CAPSL	Q8WWF8	208 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	HDAC2	Q92769	488 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM46A	Q96IP4	442 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ERMAP	Q96PL5	475 aa	Predicted RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SEPHS2	Q99611	448 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	NABP2	Q9BQ15	211 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	IFT27	Q9BW83	186 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	HDHD2	Q9H0R4	259 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	OPA3	Q9H6K4	179 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	SRA1	Q9HD15	236 aa	Known RBP	4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	POLE4	Q9NR33	117 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	C14orf119	Q9NWQ9	140 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	RHCG	Q9UBD6	479 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ATPIF1	Q9UII2	106 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	UGT2A1	Q9Y4X1	527 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	IER3IP1	Q9Y5U9	82 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	ENPP4	Q9Y6X5	453 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602	PKD1	P98161	4303 aa		4.22	□□□□□ -1.73
SEC13-219	ENST00000492602		A0A087WUU8	490 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	TEX13C	A0A0J9YWL9	993 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	hCG_1807616	A0A1W2PRN6	198 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GGT3P	A6NGU5	568 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM90A8P	A6NJQ4	464 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ANKRD30BL	A7E2S9	258 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	IQCF6	A8MYZ5	107 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602		A8MZ25	164 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602		F5H5K5	113 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602		H7C1C5	153 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	SOCS2	O14508	198 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GMDS	O60547	372 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	DCTN3	O75935	186 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	LCAT	P04180	440 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	SELL	P14151	372 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	JUNB	P17275	347 aa	Predicted RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ANOS1	P23352	680 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	AZGP1	P25311	298 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRDX6	P30041	224 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	MDH1	P40925	334 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	NAA10	P41227	235 aa	Predicted RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GPR4	P46093	362 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GZMM	P51124	257 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PSME3	P61289	254 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	LCN6	P62502	163 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRR20E	P86478	221 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRR20C	P86479	221 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRR20D	P86480	221 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRR20B	P86481	221 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PRR20A	P86496	221 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	KRR1	Q13601	381 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	OR8G1	Q15617	311 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	MICB	Q29980	383 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	TEX36	Q5VZQ5	186 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PLBD1	Q6P4A8	553 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF826P	Q6ZT77	177 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PGAP1	Q75T13	922 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	MRPL21	Q7Z2W9	205 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF429	Q86V71	674 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC15A3	Q8IY34	581 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602		Q8N1X5	172 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM156A	Q8NDB6	213 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	OR2T4	Q8NH00	348 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	OR8S1	Q8NH09	359 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	OR52J3	Q8NH60	311 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GNPDA2	Q8TDQ7	276 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms