RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 UQCRFS1P47985 274 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 HMGA2P52926 109 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ADARB1P78563 741 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RAB35Q15286 201 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RSU1Q15404 277 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MS4A18Q3C1V0 323 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ACSM3Q53FZ2 586 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 EMC4Q5J8M3 183 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM244Q5VVB8 128 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CD276Q5ZPR3 534 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FAHD1Q6P587 224 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 LYPD8Q6UX82 237 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR6X1Q8NH79 312 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ASB10Q8WXI3 467 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 GHSRQ92847 366 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 TMEM106AQ96A25 262 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 C14orf79Q96F83 325 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RNF170Q96K19 258 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 DDOQ99489 341 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SPRY4Q9C004 299 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 NELFAQ9H3P2 528 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 C12orf10Q9HB07 376 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 NRIP3Q9NQ35 241 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 GPR173Q9NS66 373 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PIGLQ9Y2B2 252 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 EML5Q05BV3 1969 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ERVH48-1M5A8F1 160 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AIPO00170 330 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AQP7O14520 342 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SEMA7AO75326 666 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 WISP2O76076 250 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 HPNP05981 417 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF708P17019 499 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ETV6P41212 452 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 LHX2P50458 406 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MTCP1P56278 107 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CLDN12P56749 244 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CLDN18P56856 261 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF121P58317 390 aaPredicted RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RAB4BP61018 213 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 BTG1P62324 171 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 IL13RA1P78552 427 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FOXO1Q12778 655 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR8B8Q15620 311 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 LTC4SQ16873 150 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF718Q3SXZ3 478 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ACSF3Q4G176 576 aaPredicted RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SOWAHCQ53LP3 525 aaPredicted RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ELFN2Q5R3F8 820 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AWAT2Q6E213 333 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SLC22A24Q8N4F4 322 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR52H1Q8NGJ2 320 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR13C5Q8NGS8 318 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR10R2Q8NGX6 335 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FOXRED1Q96CU9 486 aaPredicted RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR14A2Q96R54 314 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SIGLEC11Q96RL6 698 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SF3B5Q9BWJ5 86 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 GPR84Q9NQS5 396 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 GLRX2Q9NS18 164 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PSORS1C1Q9UIG5 152 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 LSM5Q9Y4Y9 91 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PLCE1Q9P212 2302 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 C10orf142B7Z368 130 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 H7C1Q1 480 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ARPC3O15145 178 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SHOXO15266 292 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MED6O75586 246 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 WISP1O95388 367 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AKAIN1P0CW23 69 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AMY2BP19961 511 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SERPINA2P20848 420 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CHATP28329 748 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 PTGDSP41222 190 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RAD52P43351 418 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 KIR2DL3P43628 341 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AKR1C2P52895 323 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 UBE2KP61086 200 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ISL1P61371 349 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 AKR1C1Q04828 323 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CD300CQ08708 224 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 EXOSC2Q13868 293 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SLC17A1Q14916 467 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CHRFAM7AQ494W8 412 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FNDC7Q5VTL7 733 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FIP1L1Q6UN15 594 aaKnown RBP3.94□□□□□ -1.78
TRA2B-215ENST00000492417 SYT9Q86SS6 491 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 TRAPPC6BQ86SZ2 158 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 MDP1Q86V88 176 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 DOLPP1Q86YN1 238 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FBXL14Q8N1E6 418 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 FADS6Q8N9I5 356 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 CLRN3Q8NCR9 226 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR6M1Q8NGM8 313 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 OR1F12Q8NHA8 337 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 DYNC2LI1Q8TCX1 351 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ASB17Q8WXJ9 295 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 RAB3CQ96E17 227 aa3.94□□□□□ -1.78
TRA2B-215ENST00000492417 ZNF837Q96EG3 531 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms