RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 STPG2Q8N412 459 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 PNLDC1Q8NA58 520 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 ST8SIA2Q92186 375 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 PLA2G3Q9NZ20 509 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 PADI1Q9ULC6 663 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 RIF1Q5UIP0 2472 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 DIDO1Q9BTC0 2240 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 FAM166BA8MTA8 275 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 EIF1BO60739 113 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 TMEM225BP0DP42 221 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 OPRM1P35372 400 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 HTR5AP47898 357 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 DUSP3P51452 185 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 RPS27AP62979 156 aaKnown RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 RGS7BPQ6MZT1 257 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 C5orf24Q7Z6I8 188 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 SCARB1Q8WTV0 552 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 PHB2Q99623 299 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 ACKR4Q9NPB9 350 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 COMMD9Q9P000 198 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 R4GN57 208 aa10.87□□□□□ -0.67
HMGN1-220ENST00000492280 COL27A1Q8IZC6 1860 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-220ENST00000492280 A0A087WZY1 265 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 A0A096LPE4 126 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 A0A1W2PPZ6 126 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 RPA2P15927 270 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CCNOP22674 350 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 MTCP1P56278 107 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 MPPED2Q15777 294 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CLPPQ16740 277 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 TUSC1Q2TAM9 212 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 DCAF12Q5T6F0 453 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 TMEM200AQ86VY9 491 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 GALNT11Q8NCW6 608 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 OR5H2Q8NGV7 314 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 MITD1Q8WV92 249 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 S100A13Q99584 98 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 NAA11Q9BSU3 229 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ESPL1Q14674 2120 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 DHRS7CA6NNS2 312 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 YKT6O15498 198 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 B3GALNT1O75752 331 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF84P51523 738 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF239Q16600 458 aaKnown RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ANKRD55Q3KP44 614 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 JMJD6Q6NYC1 403 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 LINC00696Q6ZRV3 163 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 RAB11FIP2Q7L804 512 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 AAED1Q7RTV5 226 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 HOGA1Q86XE5 327 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 REEP6Q96HR9 211 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 THOC3Q96J01 351 aaKnown RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 SIGLEC12Q96PQ1 595 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 PECRQ9BY49 303 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF716A6NP11 495 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 OR3A2P47893 321 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 AKR1C2P52895 323 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 SUPT4H1P63272 117 aaKnown RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 AKR1C1Q04828 323 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 ECH1Q13011 328 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 PIGYQ3MUY2 71 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CLVS2Q5SYC1 327 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CLEC18BQ6UXF7 455 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 OR51F2Q8NH61 342 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 IER2Q9BTL4 223 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 URM1Q9BTM9 101 aaKnown RBP10.86□□□□□ -0.67
HMGN1-220ENST00000492280 TNFSF18Q9UNG2 199 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 CSAG2Q9Y5P2 127 aa10.86□□□□□ -0.67
HMGN1-220ENST00000492280 LOC102725191A0A1B0GVB3 256 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 MSGN1A6NI15 193 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 IL2RAP01589 272 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 CD8AP01732 235 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 CHRM2P08172 466 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 HOXB5P09067 269 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 JMJD7P0C870 316 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 PGAM2P15259 253 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 C4BPBP20851 252 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 AADACL3Q5VUY0 350 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 DRAM2Q6UX65 266 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 OR2W3Q7Z3T1 314 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 RRNAD1Q96FB5 475 aaKnown RBP10.85□□□□□ -0.67
HMGN1-220ENST00000492280 FAAP24Q9BTP7 215 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 CRIM1Q9NZV1 1036 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 H0YIZ8 118 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 SHOXO15266 292 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 IGLV3-1P01715 115 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 MPLP40238 635 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms