RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 XRCC3O43542 346 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 CNOT4O95628 575 aaKnown RBP11.97□□□□□ -0.49
SMPD4-219ENST00000491128 MT-ND4P03905 459 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 GNB3P16520 340 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 CA6P23280 308 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 CALCRP30988 508 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 MPV17P39210 176 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 GDNFP39905 211 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 PRDX4Q13162 271 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 RIN1Q13671 783 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 P2RY6Q15077 328 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 RELL2Q8NC24 303 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 BORCS8Q96FH0 119 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 RADILQ96JH8 1075 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 UQCC2Q9BRT2 126 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SFXN3Q9BWM7 321 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 ACTR6Q9GZN1 396 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SP140LQ9H930 580 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 NLKQ9UBE8 527 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 ATPIF1Q9UII2 106 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 OSGIN2Q9Y236 505 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 IGSF10Q6WRI0 2623 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 IGKV3-15P01624 115 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 PRF1P14222 555 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 CBR1P16152 277 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 KIR2DL3P43628 341 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SNU13P55769 128 aaKnown RBP11.97□□□□□ -0.49
SMPD4-219ENST00000491128 UCP2P55851 309 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 PPP1CBP62140 327 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 HOXA4Q00056 320 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-219ENST00000491128 PCSK4Q6UW60 755 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 Q6ZSR3 168 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 UTS2BQ765I0 119 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SELENOIQ9C0D9 397 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 RGCCQ9H4X1 137 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 TUBD1Q9UJT1 453 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 SLC25A15Q9Y619 301 aa11.97□□□□□ -0.49
SMPD4-219ENST00000491128 IGKV1-12A0A0C4DH73 117 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 LYRM1O43325 122 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 IGKV1D-12P01611 117 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 CFPP27918 469 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 FABP6P51161 128 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 CD300CQ08708 224 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 GPR176Q14439 515 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 BRICD5Q6PL45 260 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 TOMM5Q8N4H5 51 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 OR8S1Q8NH09 359 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 HPSE2Q8WWQ2 592 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 MRI1Q9BV20 369 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 KCNN3Q9UGI6 736 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 DIDO1Q9BTC0 2240 aaKnown RBP11.96□□□□□ -0.49
SMPD4-219ENST00000491128 USP24Q9UPU5 2620 aa11.96□□□□□ -0.49
SMPD4-219ENST00000491128 CDC14BO60729 498 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 CCKARP32238 428 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 GMFBP60983 142 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 PITPNAQ00169 270 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 TMEM42Q69YG0 159 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 VHLLQ6RSH7 139 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 PNLDC1Q8NA58 520 aaKnown RBP11.96□□□□□ -0.5
SMPD4-219ENST00000491128 SMIM4Q8WVI0 70 aa11.96□□□□□ -0.5
SMPD4-219ENST00000491128 EIF3KQ9UBQ5 218 aaKnown RBP11.96□□□□□ -0.5
SMPD4-219ENST00000491128 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 RAB27BO00194 218 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 BPNT1O95861 308 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 CRHP06850 196 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-219ENST00000491128 RBP2P50120 134 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 CCR6P51684 374 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 ASAH1Q13510 395 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 S100A13Q99584 98 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 POU2F3Q9UKI9 436 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 EPG5Q9HCE0 2579 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 HTR3BO95264 441 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 SFTPBP07988 381 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 GABRR1P24046 479 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMPD4-219ENST00000491128 OPRM1P35372 400 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 HAAOP46952 286 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 NPBWR2P48146 333 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 FJX1Q86VR8 437 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 NUDCD2Q8WVJ2 157 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 FCAMRQ8WWV6 532 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 CMTM3Q96MX0 182 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 TMEM59Q9BXS4 323 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 RAB22AQ9UL26 194 aa11.95□□□□□ -0.5
SMPD4-219ENST00000491128 ARPC4-TTLL3A0A0A6YYG9 625 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 F8VVB4 439 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 F8VWA3 439 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 H0YL77 283 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 PTTG1O95997 202 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ALDOBP05062 364 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 MGMTP16455 207 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 NR4A2P43354 598 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ZP1P60852 638 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 PSG7Q13046 419 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms