RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 RNF170Q96K19 258 aa13.37□□□□□ -0.27
TRA2A-208ENST00000490942 Q96MF0 132 aa13.37□□□□□ -0.27
TRA2A-208ENST00000490942 MGLLQ99685 303 aa13.37□□□□□ -0.27
TRA2A-208ENST00000490942 SLC7A11Q9UPY5 501 aa13.37□□□□□ -0.27
TRA2A-208ENST00000490942 CDC14BO60729 498 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 OCM2P0CE71 109 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 IRF2P14316 349 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 CPEP16870 476 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 PRKACBP22694 351 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 MAPK3P27361 379 aaPredicted RBP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 NR4A2P43354 598 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 GPR6P46095 362 aaPredicted RBP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 FUT6P51993 359 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 RPS11P62280 158 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 ZNF154Q13106 437 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 MOB3CQ70IA8 216 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 WDR86Q86TI4 376 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 ZNF573Q86YE8 665 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 OR10Z1Q8NGY1 313 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 RAB1CQ92928 201 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 FGGYQ96C11 551 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 NR1H4Q96RI1 486 aaPredicted RBP13.36□□□□□ -0.27
TRA2A-208ENST00000490942 OR51I2Q9H344 312 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 ZNF696Q9H7X3 374 aa13.36□□□□□ -0.27
TRA2A-208ENST00000490942 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
TRA2A-208ENST00000490942 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 PQLC2LA1A4F0 135 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 TMEM178BH3BS89 294 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 GPX5O75715 221 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
TRA2A-208ENST00000490942 PCMT1P22061 227 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 THBS2P35442 1172 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 MAP2K4P45985 399 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 LOXL1Q08397 574 aaPredicted RBP13.35□□□□□ -0.27
TRA2A-208ENST00000490942 DOC2BQ14184 412 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 UBE2V2Q15819 145 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 ZNF529Q6P280 563 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 MOGAT3Q86VF5 341 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 PHYHIPQ92561 330 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 DVL3Q92997 716 aaPredicted RBP13.35□□□□□ -0.27
TRA2A-208ENST00000490942 TMEM106AQ96A25 262 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 CPNE2Q96FN4 548 aaPredicted RBP13.35□□□□□ -0.27
TRA2A-208ENST00000490942 BPESC1Q9GZL8 116 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 ZCCHC4Q9H5U6 513 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 RNF7Q9UBF6 113 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
TRA2A-208ENST00000490942 A0A087WXM4 84 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 A0A096LNT2 108 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 ZNF732B4DXR9 585 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 LMX1BO60663 402 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 LHBP01229 141 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 FOSL1P15407 271 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 ATF1P18846 271 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 MPPED2Q15777 294 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 CARTPTQ16568 116 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 TMEM155Q4W5P6 130 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 CEP78Q5JTW2 689 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 PRAMEF6Q5VXH4 476 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 C11orf53Q8IXP5 236 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 MUC20Q8N307 709 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-208ENST00000490942 ZFP41Q8N8Y5 198 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 OPALINQ96PE5 141 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 REG4Q9BYZ8 158 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 PKIBQ9C010 78 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
TRA2A-208ENST00000490942 PPP1R3EQ9H7J1 279 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 GPR173Q9NS66 373 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
TRA2A-208ENST00000490942 TRBV5-7A0A0A0MS05 114 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 TRIM64BA6NI03 449 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 A6NLC8 198 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 PPIHO43447 177 aaKnown RBP13.33□□□□□ -0.28
TRA2A-208ENST00000490942 SULT1B1O43704 296 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 SC5DO75845 299 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 GRPP07492 148 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 HSMCR30P0CW71 290 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 FSTP19883 344 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 USF1P22415 310 aaPredicted RBP13.33□□□□□ -0.28
TRA2A-208ENST00000490942 MPZP25189 248 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 PMELP40967 661 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 RBP2P50120 134 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 GPM6AP51674 278 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 BTG1P62324 171 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 WDR82Q6UXN9 313 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 LHFPL2Q6ZUX7 228 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 PHC2Q8IXK0 858 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 SCCPDHQ8NBX0 429 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 ZNF671Q8TAW3 534 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 BORCS8Q96FH0 119 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 VCX3AQ9NNX9 186 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms