RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 WIF1Q9Y5W5 379 aa3.04□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 A0A1W2PQL4 384 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ISPDA4D126 451 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 H3BNH8 94 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 PGRMC1O00264 195 aaKnown RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 CYTH3O43739 400 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 MPZL2O60487 215 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 AQP8O94778 261 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 HPRT1P00492 218 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ASS1P00966 412 aaKnown RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OXTP01178 125 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 HLA-AP01891 365 aaKnown RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 TCP1P17987 556 aaKnown RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 GNRHRP30968 328 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 CAPZBP47756 277 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 GNG10P50151 68 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 AP1S2P56377 157 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 CXCR4P61073 352 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 CLINT1Q14677 625 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 KIAA0087Q14695 138 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 PTGES3Q15185 160 aaKnown RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 GUSBP1Q15486 140 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR7A5Q15622 319 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 TRAM1Q15629 374 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR10J3Q5JRS4 329 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 HBMQ6B0K9 141 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 FAM45BPQ6NSW5 357 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 MBOAT2Q6ZWT7 520 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ITPRIPQ8IWB1 547 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR5B17Q8NGF7 314 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR2A1Q8NGT9 310 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 TEX47Q8TBZ9 253 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ACTL9Q8TC94 416 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR51E1Q8TCB6 317 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 FAM45AQ8TCE6 357 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 APH1BQ8WW43 257 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR5P2Q8WZ92 322 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 PTH2Q96A98 100 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 YIPF6Q96EC8 236 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 SGTBQ96EQ0 304 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 RNF145Q96MT1 663 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF681Q96N22 645 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF442Q9H7R0 627 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 REEP1Q9H902 201 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZDHHC4Q9NPG8 344 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 KCNJ16Q9NPI9 418 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ACOT13Q9NPJ3 140 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF226Q9NYT6 803 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 PCYOX1Q9UHG3 505 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 STOML2Q9UJZ1 356 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 CES1P1Q9UKY3 287 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 GUCA1BQ9UMX6 200 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 USH1CQ9Y6N9 552 aa3.03□□□□□ -1.92
HMGB1P38-201ENST00000490557 COL22A1Q8NFW1 1626 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A0B4J2E0 115 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A0G2JLM5 398 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A1B0GX12 115 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A1W2PRG6 482 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 C12orf77C9JDV5 145 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 H0YJX3 145 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 J3QLI3 93 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF593O00488 134 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 GABRPO00591 440 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 NUPL2O15504 423 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 CRXO43186 299 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 SSNA1O43805 119 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC16A7O60669 478 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPAG7O75391 227 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MPZL1O95297 269 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PTTG1O95997 202 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 IL6P05231 212 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 FABP1P07148 127 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TDGF1P13385 188 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 CELP19835 753 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 F8A1P23610 371 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 G0S2P27469 103 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIR3DL2P43630 455 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TUFMP49411 452 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 RORCP51449 518 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TDGF1P3P51864 188 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MNAT1P51948 309 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 AP2S1P53680 142 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TAS2R31P59538 309 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 RAB8AP61006 207 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF92Q03936 586 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 CDC20Q12834 499 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MLLT11Q13015 90 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PDIA2Q13087 525 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PDK2Q15119 407 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TRIP13Q15645 432 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM27D1Q5T7N8 215 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 HHATQ5VTY9 493 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPOPLQ6IQ16 392 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 CNIH2Q6PI25 160 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZFP2Q6ZN57 461 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 Q6ZT83 130 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms