RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HMGN5P82970 282 aaKnown RBP1.87□□□□□ -2.11
CCDC39-206ENST00000489868 KDSRQ06136 332 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 FMODQ06828 376 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 TFDP2Q14188 446 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 ZNF141Q15928 474 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 PDZD11Q5EBL8 140 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 HHATQ5VTY9 493 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 METAP1DQ6UB28 335 aaPredicted RBP1.87□□□□□ -2.11
CCDC39-206ENST00000489868 EIF3MQ7L2H7 374 aaKnown RBP1.87□□□□□ -2.11
CCDC39-206ENST00000489868 C8orf31Q8N9H6 132 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 OR2M7Q8NG81 312 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 OR8K3Q8NH51 312 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 ACTL9Q8TC94 416 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 RDH12Q96NR8 316 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 FAM60AQ9NP50 221 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 TMEM100Q9NV29 134 aa1.87□□□□□ -2.11
CCDC39-206ENST00000489868 MYEF2Q9P2K5 600 aaKnown RBP1.87□□□□□ -2.11
CCDC39-206ENST00000489868 ZNF608Q9ULD9 1512 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 BAHCC1Q9P281 2608 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 IGKV1OR2-108A0A075B7D4 117 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 KCNK2O95069 426 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 FARS2O95363 451 aaKnown RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 PRSS3P35030 304 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 IRF8Q02556 426 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 KLHL40Q2TBA0 621 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 BZW1Q7L1Q6 419 aaKnown RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 APRG1Q8IVJ8 170 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 LRRC8AQ8IWT6 810 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 CMTM2Q8TAZ6 248 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 SFXN5Q8TD22 340 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 ITLN2Q8WWU7 325 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 RBPMSQ93062 196 aaKnown RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 SMARCD1Q96GM5 515 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 DERL3Q96Q80 235 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 KLF6Q99612 283 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 BPIFA3Q9BQP9 254 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 ELOVL6Q9H5J4 265 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 NLE1Q9NVX2 485 aaPredicted RBP1.86□□□□□ -2.11
CCDC39-206ENST00000489868 CES1P1Q9UKY3 287 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 PPIL1Q9Y3C6 166 aa1.86□□□□□ -2.11
CCDC39-206ENST00000489868 ZBTB5O15062 677 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 AQP9O43315 295 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 BEX3Q00994 111 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 SSX9Q7RTT3 188 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 FAM122BQ7Z309 247 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 SLC30A8Q8IWU4 369 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 ZCCHC24Q8N2G6 241 aaKnown RBP1.85□□□□□ -2.11
CCDC39-206ENST00000489868 CCDC148Q8NFR7 591 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 TSEN15Q8WW01 171 aaKnown RBP1.85□□□□□ -2.11
CCDC39-206ENST00000489868 OTUB2Q96DC9 234 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 SNF8Q96H20 258 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 REEP1Q9H902 201 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 MCUBQ9NWR8 336 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 NDRG2Q9UN36 371 aaKnown RBP1.85□□□□□ -2.11
CCDC39-206ENST00000489868 SIGLEC1Q9BZZ2 1709 aa1.85□□□□□ -2.11
CCDC39-206ENST00000489868 A0A075B6Q4 140 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 A0A0B4J2E0 115 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 CATP04040 527 aaKnown RBP1.84□□□□□ -2.11
CCDC39-206ENST00000489868 UBCP0CG48 685 aaKnown RBP1.84□□□□□ -2.11
CCDC39-206ENST00000489868 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 GRB2P62993 217 aaKnown RBP1.84□□□□□ -2.11
CCDC39-206ENST00000489868 RCN1Q15293 331 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 OFCC1Q8IZS5 231 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 BBS5Q8N3I7 341 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 YIPF6Q96EC8 236 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 NAPGQ99747 312 aaPredicted RBP1.84□□□□□ -2.11
CCDC39-206ENST00000489868 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 TBL1XR1Q9BZK7 514 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 FANCEQ9HB96 536 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 LYRM4Q9HD34 91 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 OR2S2Q9NQN1 319 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 PARP11Q9NR21 331 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 STX18Q9P2W9 335 aaKnown RBP1.84□□□□□ -2.11
CCDC39-206ENST00000489868 VAX2Q9UIW0 290 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 SORL1Q92673 2214 aa1.84□□□□□ -2.11
CCDC39-206ENST00000489868 LTBP2Q14767 1821 aa1.84□□□□□ -2.12
CCDC39-206ENST00000489868 BAZ1BQ9UIG0 1483 aaKnown RBP1.83□□□□□ -2.12
CCDC39-206ENST00000489868 J3QKU1 62 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 RGS6P49758 472 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 CPTPQ5TA50 214 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 RNF10Q8N5U6 811 aaKnown RBP1.83□□□□□ -2.12
CCDC39-206ENST00000489868 ITFG1Q8TB96 612 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 FAM57AQ8TBR7 257 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 APH1AQ96BI3 265 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 FXYD5Q96DB9 178 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 PEBP4Q96S96 227 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 ZNF649Q9BS31 505 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 TMEM175Q9BSA9 504 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 MRPS30Q9NP92 439 aaKnown RBP1.83□□□□□ -2.12
CCDC39-206ENST00000489868 INIPQ9NRY2 104 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 MCTS1Q9ULC4 181 aaKnown RBP1.83□□□□□ -2.12
CCDC39-206ENST00000489868 TBC1D24Q9ULP9 559 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 ELP1O95163 1332 aa1.83□□□□□ -2.12
CCDC39-206ENST00000489868 A0A0G2JMP0 313 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 A0A0X1KG70 313 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 CTAGE15A4D2H0 777 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 H3BQ85 93 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 SIVA1O15304 175 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms