RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 IL4P05112 153 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 IL1RNP18510 177 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 GNRHRP30968 328 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TGFBR1P36897 503 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 GPR4P46093 362 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 GALR1P47211 349 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 PRLHRP49683 370 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 CCNG1P51959 295 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 HCCSP53701 268 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 AP1S2P56377 157 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 SLC25A35Q3KQZ1 300 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 C6orf99Q4VX62 202 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ZNF101Q8IZC7 436 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 DAW1Q8N136 415 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ZCCHC24Q8N2G6 241 aaKnown RBP1.21□□□□□ -2.22
CPSF3-205ENST00000489629 OR13C9Q8NGT0 318 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 OR13G1Q8NGZ3 307 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 RXFP4Q8TDU9 374 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ASZ1Q8WWH4 475 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 RTN4IP1Q8WWV3 396 aaPredicted RBP1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TMEM234Q8WY98 164 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 CPB2Q96IY4 423 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 OR4K3Q96R72 315 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TEAD3Q99594 435 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 SIKE1Q9BRV8 207 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 CHCHD7Q9BUK0 85 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ZNF717Q9BY31 904 aaPredicted RBP1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TM6SF2Q9BZW4 377 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 PORCNQ9H237 461 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ARV1Q9H2C2 271 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 CLSTN2Q9H4D0 955 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 AGPAT3Q9NRZ7 376 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 DDIT4Q9NX09 232 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 RHBDL2Q9NX52 303 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ZNF586Q9NXT0 402 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ADA2Q9NZK5 511 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 VAX2Q9UIW0 290 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 SIGLEC7Q9Y286 467 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 HES2Q9Y543 173 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 BZW2Q9Y6E2 419 aaKnown RBP1.21□□□□□ -2.22
CPSF3-205ENST00000489629 SETD1AO15047 1707 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 ADAMTSL3P82987 1691 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 IGHV3-49A0A0A0MS15 119 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 A0A1W2PRF3 423 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 A0A1W2PRM7 423 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CENPXA8MT69 81 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 LGALS9O00182 355 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 PLIN3O60664 434 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 SC5DO75845 299 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TRAPPC6AO75865 159 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CDRT1O95170 752 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 S100A9P06702 114 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 LIPCP11150 499 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 GFAPP14136 432 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CD9P21926 228 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 PAX6P26367 422 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 NUP62P37198 522 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 HADHBP55084 474 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CMC4P56277 68 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 MLF1P58340 268 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TAS2R39P59534 338 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 YWHAEP62258 255 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 RPL31P62899 125 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 SLC35B1P78383 322 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 ELF3P78545 371 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 IFITM3Q01628 133 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 IFFO1Q0D2I5 559 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 DYNC1I2Q13409 638 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 MAD2L1BPQ15013 274 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TNXAQ16473 311 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TAL2Q16559 108 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 YIF1BQ5BJH7 314 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CPTPQ5TA50 214 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 FAM222AQ5U5X8 452 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 STEAP4Q687X5 459 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 GUSBP11Q6P575 273 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 OPN5Q6U736 354 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 NDUFAF7Q7L592 441 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 SLC30A8Q8IWU4 369 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 FAM58AQ8N1B3 248 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 DRAM1Q8N682 238 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 MIR7-3HGQ8N6C7 128 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 SLC35G3Q8N808 338 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TMEM105Q8N8V8 129 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 ST20-AS1Q8NBB2 130 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 OR5T1Q8NG75 326 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 OR51A7Q8NH64 312 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 OR1L1Q8NH94 360 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 ENKURQ8TC29 256 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CPNE4Q96A23 557 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 RERGQ96A58 199 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 FAM131CQ96AQ9 280 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 S100PBPQ96BU1 408 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 CENPNQ96H22 339 aaPredicted RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 RNF170Q96K19 258 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 KCNS3Q9BQ31 491 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 UTP23Q9BRU9 249 aaKnown RBP1.2□□□□□ -2.22
CPSF3-205ENST00000489629 TMEM175Q9BSA9 504 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 EMC6Q9BV81 110 aa1.2□□□□□ -2.22
CPSF3-205ENST00000489629 ZSCAN16Q9H4T2 348 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms