RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 DOK1Q99704 481 aa15.77■□□□□ 0.12
NPHP4-209ENST00000489180 NKX2-2O95096 273 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 IGHA2P01877 340 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 CDKN2AP42771 156 aaKnown RBP15.77■□□□□ 0.11
NPHP4-209ENST00000489180 ARRDC1Q8N5I2 433 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 C19orf43Q9BQ61 176 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 KIAA1456Q9P272 454 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 IGLV3-16A0A075B6K0 115 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 SLC22A20A6NK97 555 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 PIAS2O75928 621 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 RNF212Q495C1 297 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 FAAP24Q9BTP7 215 aa15.77■□□□□ 0.11
NPHP4-209ENST00000489180 CNTRLQ7Z7A1 2325 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 CDC42EP2O14613 210 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 KRASP01116 189 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 OR3A4PP47883 348 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 SLC25A1P53007 311 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 KISS1Q15726 138 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 PRICKLE4Q2TBC4 344 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 WIPI1Q5MNZ9 446 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-209ENST00000489180 ZNF574Q6ZN55 896 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-209ENST00000489180 ACY3Q96HD9 319 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 C2CD4DB7Z1M9 353 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 ZBTB25P24278 435 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 RAB32Q13637 225 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 C6orf201Q7Z4U5 140 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 OR1J1Q8NGS3 322 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 CLDN23Q96B33 292 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 MTFP1Q9UDX5 166 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 A0A1W2PR80 420 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 ADAM20O43506 726 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 COX7A2P2O60397 106 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 B3GALNT1O75752 331 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 MPZL1O95297 269 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 BPIFB3P59826 476 aa15.76■□□□□ 0.11
NPHP4-209ENST00000489180 C9orf170A2RU37 121 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 MBTPS2O43462 519 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SELENOPP49908 381 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 DSCR4P56555 118 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 C4orf45Q96LM5 186 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TOLLIPQ9H0E2 274 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 MMP26Q9NRE1 261 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TBX21Q9UL17 535 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 HIST1H1DP16402 221 aaKnown RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 GABRG2P18507 467 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 FUT3P21217 361 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TIMD4Q96H15 378 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 CMTM3Q96MX0 182 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TNFSF15O95150 251 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 ITGBL1O95965 494 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SULT1A3P0DMM9 295 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SULT1A4P0DMN0 295 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SNRPEP62304 92 aaKnown RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TMEM215Q68D42 235 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 GVQW1Q8N7I0 195 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 ZDHHC22Q8N966 263 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TTC9Q92623 222 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 ABHD1Q96SE0 405 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 MMP24Q9Y5R2 645 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 LRP5O75197 1615 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 PMS2P1A4D2B8 440 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 DBX1A6NMT0 343 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 DEFB108AA8MXU0 73 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 EPPINO95925 133 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SUMO3P55854 103 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 ERVFC1-1P60608 527 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 DEFB109BQ30KR1 87 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 KHDC1LQ5JSQ8 128 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 ZNF784Q8NCA9 323 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 UBE2ZQ9H832 354 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 UCK1Q9HA47 277 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 TGOLN2O43493 480 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 SFT2D2O95562 160 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 UQCC3Q6UW78 93 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 C16orf47Q6ZP98 133 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-209ENST00000489180 VPS25Q9BRG1 176 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 PRR13Q9NZ81 148 aa15.75■□□□□ 0.11
NPHP4-209ENST00000489180 CST4P01036 141 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 VAMP3Q15836 100 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 LHX8Q68G74 356 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 GNRHR2Q96P88 292 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 TOX4O94842 621 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 G0S2P27469 103 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 PRSS12P56730 875 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 OR5I1Q13606 314 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 NXF2Q9GZY0 626 aaKnown RBP15.74■□□□□ 0.11
NPHP4-209ENST00000489180 MASP2O00187 686 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 B3GNTL1Q67FW5 361 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-209ENST00000489180 SIGIRRQ6IA17 410 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 ZNF683Q8IZ20 524 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 PMCHP20382 165 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 TOMM34Q15785 309 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-209ENST00000489180 SEZ6L2Q6UXD5 910 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 CPEB3Q8NE35 698 aaKnown RBP15.74■□□□□ 0.11
NPHP4-209ENST00000489180 ANGPTL6Q8NI99 470 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 VN1R1Q9GZP7 353 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 TMPRSS5Q9H3S3 457 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 PLA2G3Q9NZ20 509 aa15.74■□□□□ 0.11
NPHP4-209ENST00000489180 TNRC6CQ9HCJ0 1690 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms