RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 IQCF6A8MYZ5 107 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 CRTAPO75718 401 aaPredicted RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 UPK1BO75841 260 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 SCGNO76038 276 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 KDM4BO94953 1096 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 CYB5AP00167 134 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 PLATP00750 562 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 RAB6AP20340 208 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 FABP6P51161 128 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 GPM6AP51674 278 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 EFNB2P52799 333 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 KLF3P57682 345 aaPredicted RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 SELENOVP59797 346 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 BSPH1Q075Z2 132 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 PSG7Q13046 419 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 RSU1Q15404 277 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 OR8G1Q15617 311 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 FAM189A2Q15884 450 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 ZNF79Q15937 498 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 ZNF181Q2M3W8 571 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 SLC22A6Q4U2R8 563 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 TRIQKQ629K1 86 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 PYHIN1Q6K0P9 492 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 VHLLQ6RSH7 139 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 SLC22A25Q6T423 547 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 KRT74Q7RTS7 529 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 DTX3Q8N9I9 347 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 OR4M2Q8NGB6 313 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 OR5A2Q8NGI9 324 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 C15orf40Q8WUR7 153 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 FAM46BQ96A09 425 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 PTX4Q96A99 478 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 WFIKKN1Q96NZ8 548 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 MICU1Q9BPX6 476 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 SRRQ9GZT4 340 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 ESRP2Q9H6T0 727 aaKnown RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 ABCB10Q9NRK6 738 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 NKIRAS2Q9NYR9 191 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 MYEF2Q9P2K5 600 aaKnown RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 POU2F3Q9UKI9 436 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 RAB22AQ9UL26 194 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 FZR1Q9UM11 496 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 ING4Q9UNL4 249 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 MRPS7Q9Y2R9 242 aaKnown RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 PHF3Q92576 2039 aaKnown RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 ZNF732B4DXR9 585 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 B8ZZF3 427 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ABCD4O14678 606 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 LDLRAD4O15165 306 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 LILRA1O75019 489 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 CTAG2O75638 210 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 MPIG6BO95866 241 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 AGAP20933 346 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 KITLGP21583 273 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 CDK2P24941 298 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 GLRXP35754 106 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ALDH3B1P43353 468 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 INPP1P49441 399 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 MMP15P51511 669 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 GNG3P63215 75 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 NKX6-1P78426 367 aaPredicted RBP8.58□□□□□ -1.04
USP11-211ENST00000489111 PLA2G7Q13093 441 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 OR10K2Q6IF99 312 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 RAB12Q6IQ22 244 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 C22orf34Q6ZV56 151 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 RNF144BQ7Z419 303 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ZNF573Q86YE8 665 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 SNX29P2Q8IUI4 249 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 Q8N402 240 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
USP11-211ENST00000489111 NUP37Q8NFH4 326 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 OR8G5Q8NG78 346 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 HPSE2Q8WWQ2 592 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 OR5P3Q8WZ94 311 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 DVL3Q92997 716 aaPredicted RBP8.58□□□□□ -1.04
USP11-211ENST00000489111 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 RNF170Q96K19 258 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 GAL3ST1Q99999 423 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 SOSTQ9BQB4 213 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 URM1Q9BTM9 101 aaKnown RBP8.58□□□□□ -1.04
USP11-211ENST00000489111 TMEM59Q9BXS4 323 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 SLC22A4Q9H015 551 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 METTL9Q9H1A3 318 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 PPP1R3EQ9H7J1 279 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 PCDHB16Q9NRJ7 776 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 FBLN5Q9UBX5 448 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ATP23Q9Y6H3 246 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 ARHGAP21Q5T5U3 1957 aa8.58□□□□□ -1.04
USP11-211ENST00000489111 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 A0A0A6YYH2 397 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 PLSCR5A0PG75 271 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 DPRXA6NFQ7 191 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 TUBAL3A6NHL2 446 aa8.57□□□□□ -1.04
USP11-211ENST00000489111 A6NJ64 397 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms