RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 HSF2Q03933 536 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 PUDPQ08623 228 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 SSX1Q16384 188 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 AANATQ16613 207 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 TIMM50Q3ZCQ8 353 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 LIAT1Q6ZQX7 453 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 ADCK1Q86TW2 530 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 NKAIN4Q8IVV8 208 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 IQCF1Q8N6M8 205 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 PROKR2Q8NFJ6 384 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 OR8D4Q8NGM9 314 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 OR6S1Q8NH40 331 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 OR6X1Q8NH79 312 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 TEX47Q8TBZ9 253 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 CHPT1Q8WUD6 406 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 OR5M11Q96RB7 305 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 MGLLQ99685 303 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 PRSS27Q9BQR3 290 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 DCSTAMPQ9H295 470 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 SIAEQ9HAT2 523 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 CACYBPQ9HB71 228 aaKnown RBP9.45□□□□□ -0.9
TRIM56-204ENST00000487252 HMG20AQ9NP66 347 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 ISYNA1Q9NPH2 558 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 IL20Q9NYY1 176 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 TVP23BQ9NYZ1 205 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.45□□□□□ -0.94e-15■□□□□ 8.9
TRIM56-204ENST00000487252 ABCA13Q86UQ4 5058 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 J3QRK9 145 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 CCRL2O00421 344 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 PRODHO43272 600 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 PAHP00439 452 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 TUBG1P23258 451 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 HTR2AP28223 471 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 GDI2P50395 445 aaKnown RBP9.44□□□□□ -0.9
TRIM56-204ENST00000487252 BIDP55957 195 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 LY6EQ16553 131 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 HIST3H3Q16695 136 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 RANBP3LQ86VV4 465 aaPredicted RBP9.44□□□□□ -0.9
TRIM56-204ENST00000487252 RNF113BQ8IZP6 322 aaKnown RBP9.44□□□□□ -0.9
TRIM56-204ENST00000487252 OR52I1Q8NGK6 324 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 TNFRSF14Q92956 283 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 SLC35B4Q969S0 331 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 MND1Q9BWT6 205 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 PRRG3Q9BZD7 231 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 FAM234AQ9H0X4 552 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 POFUT1Q9H488 388 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 EGLN3Q9H6Z9 239 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 C12orf10Q9HB07 376 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 TUBG2Q9NRH3 451 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 ERGIC3Q9Y282 383 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 HECTD4Q9Y4D8 3996 aa9.44□□□□□ -0.9
TRIM56-204ENST00000487252 TRAV36DV7A0A075B6V5 113 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ECDO95905 644 aaPredicted RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 HMGN1P05114 100 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 SNRPBP14678 240 aaKnown RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 TGFBR1P36897 503 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 GATA4P43694 442 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 HOXC5Q00444 222 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 PRKCDQ05655 676 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 RAB40BQ12829 278 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MLLT11Q13015 90 aaPredicted RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 SPHARQ15513 63 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 SNAPC1Q16533 368 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 AADACL4Q5VUY2 407 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ZNF613Q6PF04 617 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 BTN2A1Q7KYR7 527 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MOGAT3Q86VF5 341 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 SBSPONQ8IVN8 264 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 LRRC18Q8N456 261 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 LY6G5BQ8NDX9 201 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 OR4Q3Q8NH05 313 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MCFD2Q8NI22 146 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 Q8TCH9 128 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 TMEM255BQ8WV15 326 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 FAM46AQ96IP4 442 aaKnown RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 C4orf45Q96LM5 186 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 DCTN5Q9BTE1 182 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 JAM3Q9BX67 310 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MEGF9Q9H1U4 602 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ARMC7Q9H6L4 198 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ELOVL3Q9HB03 270 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 ETAA1Q9NY74 926 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 MRPL39Q9NYK5 338 aaKnown RBP9.43□□□□□ -0.9
TRIM56-204ENST00000487252 CLEC2DQ9UHP7 191 aa9.43□□□□□ -0.9
TRIM56-204ENST00000487252 A0A075B6Q4 140 aa9.42□□□□□ -0.9
TRIM56-204ENST00000487252 A0A1B0GWJ7 208 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms