RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TSPAN11A1L157 253 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 LILRA5A6NI73 299 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 HACD1B0YJ81 288 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 TRDCB7Z8K6 153 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 H3BQF6 201 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 K7EM74 188 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 K7EQS6 105 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 M0QYV0 167 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 CRXO43186 299 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 OR7A10O76100 309 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 S1PR2O95136 353 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 IL6RP08887 468 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 RFC3P40938 356 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 XCR1P46094 333 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 BDKRB1P46663 353 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 TAF6P49848 677 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 RAB8AP61006 207 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SLC7A9P82251 487 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 NHLH2Q02577 135 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 MFGE8Q08431 387 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 INCA1Q0VD86 236 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 LIN52Q52LA3 116 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SIRPB2Q5JXA9 342 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SLC35D3Q5M8T2 416 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 C9orf64Q5T6V5 341 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SP5Q6BEB4 398 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 LPCAT3Q6P1A2 487 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 GRINAQ7Z429 371 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 TPRX1Q8N7U7 411 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 OR4K15Q8NH41 348 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 OR5K2Q8NHB8 316 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 RNF128Q8TEB7 428 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 C1orf54Q8WWF1 131 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 DNAJC9Q8WXX5 260 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 OR5P2Q8WZ92 322 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 ABTB1Q969K4 478 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 PNPLA2Q96AD5 504 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 NTNG2Q96CW9 530 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 IMP4Q96G21 291 aaKnown RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 ZNF419Q96HQ0 510 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 BTF3L4Q96K17 158 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SERPINI1Q99574 410 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 DOK1Q99704 481 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 ATF6BQ99941 703 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 NIPSNAP3BQ9BS92 247 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 DCTN5Q9BTE1 182 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 ALG9Q9H6U8 611 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 NMNAT1Q9HAN9 279 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 GPR160Q9UJ42 338 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 FBXL2Q9UKC9 423 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 C14orf166Q9Y224 244 aaKnown RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 TCF19Q9Y242 345 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 PPP2R2CQ9Y2T4 447 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SNX11Q9Y5W9 270 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 SPIN1Q9Y657 262 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 MYH10P35580 1976 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 CNTRLQ7Z7A1 2325 aa4.74□□□□□ -1.65
SF1-217ENST00000486960 HRNRQ86YZ3 2850 aaPredicted RBP4.74□□□□□ -1.65
SF1-217ENST00000486960 HERC2O95714 4834 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 A0A0G2JMP0 313 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 FAM92AA1XBS5 289 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 B4DGG1 531 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 H7C2Y5 167 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 GPR31O00270 319 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 CLIC1O00299 241 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 ERI3O43414 337 aaKnown RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 GPR137BO60478 399 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 BANF1O75531 89 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 EIF3GO75821 320 aaKnown RBP eCLIP4.73□□□□□ -1.65
SF1-217ENST00000486960 OR2J2O76002 312 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 MT-CO3P00414 261 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 IFNA1P01562 189 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 GIPP09681 153 aaPredicted RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 OR4Q2P0C623 313 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 IFI30P13284 250 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 PAX6P26367 422 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 HOXD3P31249 432 aaPredicted RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 OPRD1P41143 372 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 TCTAP57738 103 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 TAS2R31P59538 309 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 RPL31P62899 125 aaKnown RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 PSG6Q00889 435 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 IL5RAQ01344 420 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 RGS1Q08116 209 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 FAM27E3Q08E93 113 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 TWF1Q12792 350 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 KPNB1Q14974 876 aaKnown RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 MPPED2Q15777 294 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 ZIC1Q15915 447 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 ISXQ2M1V0 245 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 TTLL9Q3SXZ7 439 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 PYCR3Q53H96 274 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 C1orf189Q5VU69 101 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 UBE2UQ5VVX9 321 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 TRMT10BQ6PF06 316 aaKnown RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 CASP12Q6UXS9 341 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 SLC25A48Q6ZT89 311 aaKnown RBP4.73□□□□□ -1.65
SF1-217ENST00000486960 SLC30A8Q8IWU4 369 aa4.73□□□□□ -1.65
SF1-217ENST00000486960 IFT20Q8IY31 132 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms