RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LAP3P28838 519 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 GZMMP51124 257 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 RAP1BP61224 184 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MAGOHP61326 146 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 RPL27P61353 136 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 RAP1AP62834 184 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 FMODQ06828 376 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CD47Q08722 323 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ENDOGQ14249 297 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CYP51A1Q16850 503 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF181Q2M3W8 571 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ANKDD1AQ495B1 522 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 AGKQ53H12 422 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF774Q6NX45 483 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC27A4Q6P1M0 643 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 FAM122CQ6P4D5 195 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 BTNL3Q6UXE8 466 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 Q6ZR03 302 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CCDC80Q76M96 950 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 DHDDSQ86SQ9 333 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TBC1D26Q86UD7 250 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 NKAIN4Q8IVV8 208 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 PARP8Q8N3A8 854 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM86BQ8N661 226 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2Z1Q8NG97 314 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 OR4F5Q8NH21 305 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MOSPD2Q8NHP6 518 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 VANGL1Q8TAA9 524 aaPredicted RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC26A7Q8TE54 656 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM239Q8WW34 195 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ITLN1Q8WWA0 313 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 NSMAFQ92636 917 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 HDAC2Q92769 488 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TAMM41Q96BW9 452 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TLCD1Q96CP7 247 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CMBLQ96DG6 245 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 THOC1Q96FV9 657 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 PLEKHA8Q96JA3 519 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 C17orf77Q96MU5 243 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 COG8Q96MW5 612 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CGREF1Q99674 301 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 EBF4Q9BQW3 602 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 KAT8Q9H7Z6 458 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 BEX1Q9HBH7 125 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM165Q9HC07 324 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 C20orf141Q9NUB4 165 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 ARMCX1Q9P291 453 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MIOXQ9UGB7 285 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 RIMS3Q9UJD0 308 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 PPP1R3CQ9UQK1 317 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 NDUFAF1Q9Y375 327 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MED31Q9Y3C7 131 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 PLXNB1O43157 2135 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 IGHV2-70DA0A0C4DH43 119 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 CLPSL1A2RUU4 121 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 M0QZ24 198 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 ANGPT2O15123 496 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SGCEO43556 437 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 AHCYL1O43865 530 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 NDUFA7O95182 113 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 IFNA14P01570 189 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 TK1P04183 234 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 CRYBA1P05813 215 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 RPS2P15880 293 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 MSR1P21757 451 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OMGP23515 440 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 PCGF2P35227 344 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SRP9P49458 86 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 RGS6P49758 472 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 CRYBA2P53672 197 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 RAG2P55895 527 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 MTPNP58546 118 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 TAS2R41P59536 307 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 GNB2P62879 340 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SCRN3Q0VDG4 424 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 ST3GAL3Q11203 375 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SELPLGQ14242 412 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 C2orf68Q2NKX9 166 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 DEFB112Q30KQ8 113 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OLFML2AQ68BL7 652 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 FBXW12Q6X9E4 464 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 C17orf107Q6ZR85 190 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 KIR3DL3Q8N743 410 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 CLDN22Q8N7P3 220 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 LRRC75AQ8NAA5 344 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 PCYOX1LQ8NBM8 494 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR8G5Q8NG78 346 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR5L1Q8NGL2 311 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR10S1Q8NGN2 331 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR13G1Q8NGZ3 307 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR10A6Q8NH74 314 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 PFN4Q8NHR9 129 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 C10orf82Q8WW14 230 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 BPIFA2Q96DR5 249 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 FAM71F1Q96KD3 344 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2V2Q96R30 315 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SH3GL1Q99961 368 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 CITED1Q99966 193 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms